DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8028 and slc16a3

DIOPT Version :9

Sequence 1:NP_001097031.2 Gene:CG8028 / 32923 FlyBaseID:FBgn0031010 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001007912.1 Gene:slc16a3 / 493294 XenbaseID:XB-GENE-483002 Length:473 Species:Xenopus tropicalis


Alignment Length:546 Identity:127/546 - (23%)
Similarity:203/546 - (37%) Gaps:134/546 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LEAPDGGWGILVCIGMALPFTSALAALP-SFGLVFGEFLKSIGAETSAMAIITSAFFSSMSFAGL 94
            ::|||||||..|..| ....|....|.| :..:.|.|.::..|...|..|.|:|...:.:...|.
 Frog    13 VKAPDGGWGWAVLFG-CFVITGFSYAFPKAVSVFFKELIREFGIGYSDTAWISSILLAMLYGTGP 76

  Fly    95 FSGSLFQRFGMRQVGVTGGILYFLGTGMQLFATSTLHLIMAFSVVQGFAFGLMVPTCYTTFNHYF 159
            .......|||.|.|.:.||:...||.....|.||.|.:.:...|:.|....|.........|.||
 Frog    77 LCSICVNRFGCRPVMMVGGLFAALGMVAASFCTSILTIYLTAGVITGLGLALNFQPSLIMLNRYF 141

  Fly   160 VKNRVMWMSFAQTLIGLGSMLYPIVM----QKLMSWYGFRGCLLILTGLNAHAVFGMLVMHPVEW 220
            .|.|.:    |..|...||.::...:    |.|...:|:||..|||.||..:......:|.|:|.
 Frog   142 DKRRPL----ANGLAAAGSPVFLCALSPLGQILQYEFGWRGGFLILGGLLLNCCACGALMRPLEP 202

  Fly   221 HMRRVPIQPEEQEELKELSPTVVIRVQPETPLKATREEPNFHTADPGARKLSHAEEQMLK----V 281
            ..:.|    ||.::.||:.|                           .:||  .:..:.|    |
 Frog   203 PKKAV----EEVKDTKEIKP---------------------------KKKL--LDFSVFKDRGFV 234

  Fly   282 LSSRASSITSLGNWSGPVVVSDASPQMMHSLQTSRRPSTIAGASGAVAPAHATKKSWVRTIVDFL 346
            :.:.|:||..||.:..||.|                   ::.|.....|  .||.:::.|::.|:
 Frog   235 IYTLAASIMVLGLFVPPVFV-------------------VSYAKDIGIP--DTKAAFLLTVLGFI 278

  Fly   347 DLTLLKKPIFVNIVLGITFALYSDITFFTMQP--VYLFELGYSRPDTATIIAIGAAADLASRIFL 409
            |       ||.....|:...|..      ::|  ||||  |::.........:|:.||....:  
 Frog   279 D-------IFARPTCGVITGLKQ------VRPYAVYLF--GFAMVFNGFTDLMGSMADSFGGL-- 326

  Fly   410 AITAVCIQVPSRYIYLAGAVFTVFARFAFN--GITQFVGMACITAVIGFLRTWLHVPLPLVFADY 472
                              .||.:|...::.  |..||   ..:.|::|                 
 Frog   327 ------------------VVFCIFFGISYGMVGALQF---EVLMAIVG----------------- 353

  Fly   473 LPKERFATGYGLFMFIQGNAMFLIGPIVGFIRDKTRDYIFVFHILNGFMILCAAPWVLEV---LI 534
              ..:|::..||.:..:..|:.:..|..|.|.|.|..|:||| |:.|..::.:| :||.:   ..
 Frog   354 --THKFSSAIGLVLLAEACAVLIGPPSAGKILDATGKYMFVF-IIAGVEVVTSA-FVLTLGNFFC 414

  Fly   535 VKFRRRNKIERNNVDHEDVDNQGRSA 560
            :|........::|.:.|::.....||
 Frog   415 IKKTVEEPHHKDNAEIEELKKLDGSA 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8028NP_001097031.2 MFS 40..>215 CDD:119392 48/179 (27%)
slc16a3NP_001007912.1 MFS_MCT3_4 21..411 CDD:340988 116/507 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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