DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8028 and chk

DIOPT Version :9

Sequence 1:NP_001097031.2 Gene:CG8028 / 32923 FlyBaseID:FBgn0031010 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster


Alignment Length:770 Identity:149/770 - (19%)
Similarity:243/770 - (31%) Gaps:287/770 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QSRPAYQMKKSKSYTLEAPDGGWGILVCIGMALPFTSALAALP------SFGLVFGEFLKSIGAE 74
            :|..:.....::..|.:.||||:|.:|.      |.|.:.:|.      ||||:..|.|:..|..
  Fly   115 ESGDSIDSSSTEKKTPKMPDGGYGWVVV------FASLVVSLIADGLSFSFGLINVELLEYFGES 173

  Fly    75 TSAMAIITSAFFSSMSFAGLFSGSLFQRFGMRQVGVTGGILYFLGTGMQLFATSTLHLIMAFSVV 139
            ||..|.|:|.|||.....|....:|..::|.|::.:.||::...|..:..|..|...|::.|.::
  Fly   174 TSKTAWISSLFFSVPLLMGPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGII 238

  Fly   140 QGFAFGLMVPTCYTTFNHYFVKNRVMWMSFAQTLIGLGSMLYPIVMQKLMSWYGFRGCLLILTG- 203
            .|...|:...|...:...:|.|.|........:..|:|:.:|..:...|:..||:||..|||.| 
  Fly   239 SGLGLGIGYVTAVVSIAFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGT 303

  Fly   204 -LNAHAVFGMLVMHPVEWHMRRVPIQPEEQ------------EELKELSPTVVIR---------- 245
             ||| .|.|.|:..| :|.:....::...|            ||:|:|..|.:.:          
  Fly   304 MLNA-CVCGALMRDP-DWLIEENRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTK 366

  Fly   246 ------VQPETP----LKATREE---PNFHTADP----------GARKLSHAE-------EQMLK 280
                  .|.:.|    ||..|.|   |.|.:...          ..|.|.|.|       |.:|.
  Fly   367 NNTEANQQIDDPLDSALKRYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLS 431

  Fly   281 VLS-------------------------------------------------------------- 283
            :.|                                                              
  Fly   432 MSSGAGAYPPSTAVIGSPDDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSD 496

  Fly   284 ------SRASSITSL------GNWSGPVVVS-----------DASPQMMHS----------LQTS 315
                  ..|||..||      ...:.|.:.:           |...:.||.          |:.|
  Fly   497 EGYLTQKHASSRYSLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPS 561

  Fly   316 R--RPSTIA--GASGAVAPAHATKKSWVRTIVDFLDLTLLKKPI--------------------- 355
            |  ||:.||  ....:|....||:::.:.:|.....|:..|||.                     
  Fly   562 RRIRPTVIAIPEQEQSVNSELATRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDM 626

  Fly   356 ------------------------------------------------FVNIVLGI-TFALYSDI 371
                                                            ||:.:..| .|:|:.|:
  Fly   627 RIHRNSIHYRGAMLNTHRYRLRASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDM 691

  Fly   372 TF--FTMQPVYLF-----------------------------ELGYSRPDTATIIAIGAAADLAS 405
            .|  |.:..::||                             ::|.::  |..:|.:|...||:.
  Fly   692 KFALFNLSTLFLFIWFIIPYLYLPDYMKQYKYDVSQSAELISDVGIAQ--TVGMIGLGYLGDLSW 754

  Fly   406 RIFLAITAVCIQVPSRYIYLAGAVFTVFARFAFNGITQFVGMACITAVIGFLRTWLHVPLPLVFA 470
            .......::|:.|....::....:           ||.::|:..:..:.||.........|.:..
  Fly   755 MNINICYSLCMLVCGASVFFMPLL-----------ITNYMGLMVMCVIFGFTFASSFSFTPSILV 808

  Fly   471 DYLPKERFATGYGLFMFIQGNAMFLIGPIVGFIR------DKTRDYIFVFHILNG 519
            ..:..:.|...|||.:.:||..|....||.|.|.      |.|..|..:|..|:|
  Fly   809 SIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEYTGRWDDTFYYAGIFIALSG 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8028NP_001097031.2 MFS 40..>215 CDD:119392 54/182 (30%)
chkNP_001163063.1 MFS 143..>315 CDD:119392 53/172 (31%)
MFS <685..869 CDD:119392 38/192 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
43.910

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