DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8028 and hrm

DIOPT Version :10

Sequence 1:NP_001097031.2 Gene:CG8028 / 32923 FlyBaseID:FBgn0031010 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster


Alignment Length:650 Identity:149/650 - (22%)
Similarity:250/650 - (38%) Gaps:117/650 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TIEHRLQSRPAYQMKKSKSYTLEAPDGGWGILVCIGMALPFTSALAALPSFGLVFGEFLKSIGAE 74
            |.|.|.::......|..|.|.|..||||||.||.:|..|........:.|||::|.||..:..:.
  Fly    26 TNESRHKTVSLINKKDDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSS 90

  Fly    75 TSAMAIITSAFFSSMSFAGLFSGSLFQRFGMRQVGVTGGILYFLGTGMQLFATSTLHLIMAFSVV 139
            .:..|.|.:..:...|..|..|..|..::..|.|.:.||....||..:..:|:|...|.:::.|:
  Fly    91 PTKAAWIPALCYFLYSSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVL 155

  Fly   140 QGFAFGLMVPTCYTTFNHYFVKNRVMWMSFAQTLIGLGSMLYPIVMQKLMSWYGFRGCLLILTGL 204
            .|...||..|........||.|.|.:......:...|||::.|.:::.|:..||:.|..||:.|:
  Fly   156 VGIGAGLSFPPTVYIVTSYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGI 220

  Fly   205 NAHAVFGMLVMHPVEWHMRRVPIQPEEQEELKELSPTVVI----RVQPETPLKATREEPNFHTAD 265
            ..:.....|...|||.||.|||...:..|.:.|.....::    .|....|.....::|......
  Fly   221 TLNVFVAALFYEPVEQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNS 285

  Fly   266 PGARKLSHAEEQMLKVLSSRASSITSLGNWSG------------PVVVSDA----SPQMMHS--- 311
            |.:......:|::..|.|:.|:.:.|... ||            ||.:...    :|..::|   
  Fly   286 PPSPLYLPGDERLQFVRSASAAVVQSYSK-SGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSS 349

  Fly   312 ---------------LQTS-------RRPSTIA-----------------------------GAS 325
                           |:.|       |.|||.:                             |:|
  Fly   350 LYAVPEGRSSSNKLTLRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSS 414

  Fly   326 GAVAPAHATKKSWVRTIVD------------FLDLTLLKKPIFVNIVLGITFALYSDITFFTMQP 378
            |......:|.:......||            |.||:|||.|:::.|::..:....|...|..:.|
  Fly   415 GTGHAGDSTGQDGSYADVDARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLP 479

  Fly   379 VYLFELGYSRPDTATIIAIGAAADLASRIFLAITAVCIQVPSRYIYLAG----AVFTVFARFAFN 439
            .:....|:::..:|.::::.:|.||..||..:..:....:|..:.::.|    .:......||:.
  Fly   480 SFGEARGFNKSLSAYLLSVVSATDLIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLALLPFAWT 544

  Fly   440 GITQFVGMACITAVIGFLRTWLHVPL-PLVFADYLPKERFATGYGLFMFIQGNAMFLIGPIVGFI 503
                 ....|....:..|.:.::|.: .::.||.|..||..:.||:.:|:.|....:..|:..:.
  Fly   545 -----YSSVCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYW 604

  Fly   504 RDKTRDYIFVFHILNGFMILCAA------PWVLEVLIVKFRRRNKIERNNVDHEDVDNQGRSAMV 562
            .:...||..:||.| |..:|..|      ||:       .||:...|      |.:|.|...|.|
  Fly   605 FEAVNDYNPLFHAL-GLTLLAGASLWSFMPWI-------NRRKANAE------EQLDAQIEKAAV 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8028NP_001097031.2 MFS_MCT_SLC16 39..531 CDD:340910 129/588 (22%)
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 47/175 (27%)
MFS <451..633 CDD:475125 40/187 (21%)

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