DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8028 and slc16a3b

DIOPT Version :9

Sequence 1:NP_001097031.2 Gene:CG8028 / 32923 FlyBaseID:FBgn0031010 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_997873.1 Gene:slc16a3b / 327276 ZFINID:ZDB-GENE-030131-5487 Length:508 Species:Danio rerio


Alignment Length:559 Identity:127/559 - (22%)
Similarity:210/559 - (37%) Gaps:151/559 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LEAPDGGWGILVCIGMALPFTSALAALP-SFGLVFGEFLKSIGAETSAMAIITSAFFSSMSFAGL 94
            ::|||||||..|..|..: .|....|.| :..:.|.|.::..|...|..|.|:|...:.:...|.
Zfish    13 VKAPDGGWGWAVLFGCFI-ITGFSYAFPKAVSVFFKELIREFGVGYSDTAWISSILLAMLYGTGP 76

  Fly    95 FSGSLFQRFGMRQVGVTGGILYFLGTGMQLFATSTLHLIMAFSVVQGFAFGLMVPTCYTTFNHYF 159
            ....|..|||.|.|.:.||:...||..:..|||:.:|:.:...|:.|....|.........|.||
Zfish    77 LCSILVNRFGCRPVMMVGGLFASLGMVLASFATNIIHIYLCTGVITGLGLALNFQPSLIMLNRYF 141

  Fly   160 VKNRVMWMSFAQTLIGLGSMLYPIVM-------QKLMSWYGFRGCLLILTGLNAHAVFGMLVMHP 217
            .:.|.:    |..|...||   |:.:       |.|...||:||..|||.||..:......:|.|
Zfish   142 SEKRPL----ANGLAAAGS---PVALCCLSPLGQVLQYKYGWRGGFLILGGLLLNCCACGALMRP 199

  Fly   218 VEWHMRRVPIQPEEQEELKELSPTVVIRVQPETPLKATREEPNFHT----ADPGARKLSHAEEQM 278
            :        :.|::..|::|         :|    |.|:.:|....    .|.|.          
Zfish   200 L--------LAPKKTSEVEE---------KP----KETKPKPKLLDFTVFKDRGF---------- 233

  Fly   279 LKVLSSRASSITSLGNWSGPVVVSDASPQMMHSLQTSRRPSTIAGASGAVAPAHATKKSWVRTIV 343
              ::.:.|:||..||.:..||.|...:.::.:                     ..||.:.:.||:
Zfish   234 --LIYTIAASIMVLGLFVPPVFVVSYAKELGN---------------------EDTKSALLLTIL 275

  Fly   344 DFLDLTLLKKPIFVNIVLGITFALYSDITFFTMQPVYLFELGYSRPDTATIIAIGAAADLASRIF 408
            .|:|  :..:|         |..:.:.:.:...:.||||.........|.|:. ..|.|.||.: 
Zfish   276 GFID--IFARP---------TSGIIAGLKWVRPRCVYLFSFAMIFNGIADILG-SFAKDYASLV- 327

  Fly   409 LAITAVCIQVPSRYIYLAGAVFTVFARFAFN--GITQFVGMACITAVIGFLRTWLHVPLPLVFAD 471
                                ||.:|...::.  |..||   ..:.|::|                
Zfish   328 --------------------VFCIFFGISYGMVGALQF---EVLMAIVG---------------- 353

  Fly   472 YLPKERFATGYGLFMFIQGNAMFLIGPIVGFIRDKTRDYIFVFHILNGFMILCAAPWVLEVLIVK 536
               .|:|::..||.:.::..|:.:..|..|.:.|.|::|::||.:....::|.|.  ||.:..:.
Zfish   354 ---TEKFSSAIGLVLLVEAIAVLVGPPGAGRLLDATKNYMYVFMLAGCEVVLSAL--VLAICNLL 413

  Fly   537 FRRRN--------KIER----------NNVDHEDVDNQG 557
            |.:|.        |:|.          |....:|.||.|
Zfish   414 FIKRKPQQPDPPAKMEMAITETEMEELNKAPKDDQDNGG 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8028NP_001097031.2 MFS 40..>215 CDD:119392 50/182 (27%)
slc16a3bNP_997873.1 MFS 22..410 CDD:119392 111/506 (22%)
MFS_1 25..376 CDD:284993 99/467 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.010

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