DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8028 and slc16a2

DIOPT Version :9

Sequence 1:NP_001097031.2 Gene:CG8028 / 32923 FlyBaseID:FBgn0031010 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001245159.1 Gene:slc16a2 / 100884148 ZFINID:ZDB-GENE-120117-1 Length:526 Species:Danio rerio


Alignment Length:586 Identity:110/586 - (18%)
Similarity:193/586 - (32%) Gaps:154/586 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PQTGIVWLTIEHRLQSRPAYQMKKSKSYTLEAPDGGWGILVCIGMALPFTSALAALPSFGLVFGE 66
            |:...|.|........|||.............|:||:|.:|.........|......|||::...
Zfish    40 PEDSTVQLIHTGCTDKRPATPPGAHPGQGFVPPEGGFGWVVVFAATWCNGSIFGIQNSFGILHMM 104

  Fly    67 FLKS---------------IGAETSAMAIITSAFFSSMSFAGLFSGSLFQRFGMRQVGVTGGILY 116
            .:|.               :||  .||.:|   ||.| ....:|:    ..||.|:..|.|..:.
Zfish   105 LVKHHEKQPDQASQFKVAWVGA--LAMGMI---FFCS-PVVSMFT----DHFGCRKTAVCGAFVA 159

  Fly   117 FLGTGMQLFATSTLHLIMAFSVVQGFAFGLMVPTCYTTF---------NHYFVKNRVMWMSFAQT 172
            |:|.....||| ||.|   :....|..||     |.::|         .|||.:.    :..|..
Zfish   160 FIGLLTSSFAT-TLGL---WYFTYGILFG-----CGSSFAFQPSLVILGHYFRQR----LGLANG 211

  Fly   173 LIGLGSMLY----PIVMQKLMSWYGFRGCLLILTGLNAHAVFGMLVMHPVEWHMRRVPIQPEEQE 233
            ::..||.|:    |::::|::...|......||      ::| |||...:....:  |:.|....
Zfish   212 VVTAGSSLFSMGLPVLLKKVVEPLGLPRTFQIL------SIF-MLVQALLALAFK--PLLPSGMC 267

  Fly   234 ELKELSPTVVIRVQPETPLKATREEPNFHTADPGARKLSHAEEQMLKVLSSRASSITSLGNWSGP 298
            .:    |.:.:...|.||..|:|.:       .|..|:.       :..:.|..||.:...|:..
Zfish   268 PM----PGMALDGGPSTPESASRWQ-------KGLAKIR-------RYFNVRVFSILTYRIWAFG 314

  Fly   299 VVVSDASPQMMHSLQTSRRPSTIAGASGAVAPAHATKKSWVRTIVDFLDLTLLKKPIFVNIVLGI 363
            |..:                                                         |||.
Zfish   315 VATA---------------------------------------------------------VLGY 322

  Fly   364 TFALYSDITFFTMQPVYLFELGYSRPDTATIIAIGAAADLASRIFLAITAVCIQVPSRYIYLAGA 428
             |..|..:..|..:     :.|.::.:...::.|||::.:...:|..|..:...|...|:.:|..
Zfish   323 -FVPYVHLLNFVKE-----QFGDTQREWLLLVCIGASSGVGRLLFGKIGDLIPGVKKIYMQVASF 381

  Fly   429 VFTVFARFAFNGITQFVGMACITAVIGFL-RTWLHVPLPLVFADYLPKERFATGYGLFMFIQGNA 492
            :..............|.|:..:..::|.. ..::.:..|:.|....|.:. :...|..:.:....
Zfish   382 ILLGVMSMMIPQCAVFEGLVVVFVLMGLCDGCFITIMAPIAFELVGPMQA-SQAIGYLLGLMAIP 445

  Fly   493 MFLIGPIVGFIRDKTRDYIFVFHILNGFMILCAAPWVLEVLIVKF----RRRNKIERNNVDHEDV 553
            |....||.|.:.|...:|...|:       |...|.::..:::.|    .:|.:..|...|...:
Zfish   446 MTAGPPIAGLLHDHFGNYHVAFY-------LAGVPPIVGGIVMFFVPLVHQRMQKRRKETDDPSM 503

  Fly   554 D 554
            |
Zfish   504 D 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8028NP_001097031.2 MFS 40..>215 CDD:119392 48/202 (24%)
slc16a2NP_001245159.1 2A0113 57..496 CDD:273325 103/559 (18%)
MFS 78..485 CDD:119392 96/527 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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