DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8028 and slc16a1a

DIOPT Version :9

Sequence 1:NP_001097031.2 Gene:CG8028 / 32923 FlyBaseID:FBgn0031010 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001243569.1 Gene:slc16a1a / 100534752 ZFINID:ZDB-GENE-110408-16 Length:461 Species:Danio rerio


Alignment Length:553 Identity:121/553 - (21%)
Similarity:191/553 - (34%) Gaps:134/553 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YTLEAPDGGWGILVCIGMALPFTSALAALPSFGLVFGEFLKSIGAETSAMAIITSAFFSSMSFAG 93
            ||  .|:||||..|.:|..:....:.|...|..:.|.|......|.:|.::.|:|...:.|...|
Zfish    11 YT--PPEGGWGWAVVLGAFISIGFSYAFPKSITVFFKEIEVIFNATSSQVSWISSIMLAVMYGGG 73

  Fly    94 LFSGSLFQRFGMRQVGVTGGILYFLGTGMQLFATSTLHLIMAFSVVQGFAFGLMVPTCYTTFNHY 158
            ..|..|..::|.|.:.:.||.|...|.....|..:...|.....||.|......:....|....|
Zfish    74 PVSSILVNKYGSRPIMILGGCLSGAGLIAASFCNTVEGLYFCVGVVGGLGLAFNLNPALTMIGKY 138

  Fly   159 FVKNRVMWMSFAQTLIGLGSMLYPIVMQKLMSW----YGFRGCLLILTGLNAH-AVFGMLVMHPV 218
            |.|.|    ..|..:...||.::...:..|.:|    :|:||..|||.||..: .|.|.|     
Zfish   139 FYKKR----PIANGIAMAGSPVFLSTLAPLNTWFFDQFGWRGSFLILGGLLLNCCVAGSL----- 194

  Fly   219 EWHMRRVPIQPEEQEELKELSPTVVIRVQPETPLKATREEPNFHTADPGARKLSHAEEQMLKVLS 283
               ||  ||.|:.|..:|                           ||..               :
Zfish   195 ---MR--PIGPKPQPAVK---------------------------ADNS---------------N 212

  Fly   284 SRASSITSLGNWSGPVVVSDASPQMMHSLQTSRRPSTIAGASGAVAPAHATKKSWVRTIVDFLDL 348
            |||..                                              :|:.|..|..|:||
Zfish   213 SRAKE----------------------------------------------RKTVVEVINGFIDL 231

  Fly   349 TLLKKPIFVNIVLG---ITFALYSDITFFTMQPVYLFELGYSRPDTATIIAIGAAADLASRIFLA 410
            ||.|...|:..:||   :.|.|:|.:.|.:.   |.......|...|.:::|.|..|:.:|..:.
Zfish   232 TLFKHRGFLLYLLGNVVMFFGLFSPLVFLSN---YAKSKQIPREKAAFLLSILAFVDMVARPSMG 293

  Fly   411 ITAVCIQVPSRYIYLAGAVFTVFARFAFNGI--------TQFVGMACITAVIGFLRTWLHVPLPL 467
            |.|....|..|..:...      |....||:        |.:.|........||...||...|..
Zfish   294 IVANTKWVRPRVQHFFA------ASILLNGVCHLLAPLSTDYTGFVIYAIFFGFAFGWLSSVLFE 352

  Fly   468 VFADYLPKERFATGYGLFMFIQGNAMFLIGPIVGFIRDKTRDYIFVFHILNGFMILCAAPWVLEV 532
            ...|.:..:||::..||...::...:.|..|::|...|...||.:.: :..|.::|..:.::...
Zfish   353 TLMDLVGAQRFSSAVGLVTIVECGPVLLGPPLLGKFNDIYHDYKYTY-MGCGIVLLIGSLFLFVG 416

  Fly   533 LIVKFR---RRNKIERNNVD-HEDVDNQGRSAM 561
            :.:.::   |..|.|....: |:|...:...|:
Zfish   417 MGINYKLLEREAKEESKKANQHDDPGKEVEEAL 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8028NP_001097031.2 MFS 40..>215 CDD:119392 46/179 (26%)
slc16a1aNP_001243569.1 2A0113 6..446 CDD:273325 120/548 (22%)
MFS 20..415 CDD:119392 108/506 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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