DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vav and ARHGEF2

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_011508441.1 Gene:ARHGEF2 / 9181 HGNCID:682 Length:1139 Species:Homo sapiens


Alignment Length:834 Identity:172/834 - (20%)
Similarity:295/834 - (35%) Gaps:292/834 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 KLFLDVCHNNFGIRDADLFEPTMLYDLTNFHRVLITLSKLSQCRKVQQLHPDLIGFNLQLSPTER 157
            :|..|.||.:.|..|               |.....|||          ...:.|.|..|   :|
Human    79 RLDQDSCHPSAGPLD---------------HSATGMLSK----------SVPVSGINCLL---DR 115

  Fly   158 SHSDEAIYKDLHSTDLNMRKTSS---------IDASASSSAEYYD------RTSQSGSLDENSDI 207
            |.:|..:.:   |:.:::||..|         :.:|...:..:..      :|.:...:.|..|.
Human   116 SDTDGNVSQ---SSAIDLRKRCSQLEGHSGTRVGSSLRQTFSFLSGMTGKAKTREKEKMKEAKDA 177

  Fly   208 TIENGTEDIDDYIEDSLSNM--------------------CDSTIDNDAEDAGVETPLLSDCQGS 252
            ...||    ..:...|:|.|                    |:.||.|..:|.      |::|  :
Human   178 RYTNG----HLFTTISVSGMTMCYACNKSITAKEALICPTCNVTIHNRCKDT------LANC--T 230

  Fly   253 HVRE-------LSFDLALDVV---SSTT--DGASNAVTPTPESY------ARQSQSPLAAAAPSV 299
            .|::       |..:.||..|   |.||  :..|:|:.|: :|:      :|:.:|.| :.|.||
Human   231 KVKQKQQKAALLKNNTALQSVSLRSKTTIRERPSSAIYPS-DSFRQSLLGSRRGRSSL-SLAKSV 293

  Fly   300 PVSAAPG-----PPMG--RLVSTSSSSSSLLVSESQRLQRAAAAVYNYRSSMASTEHEYAYIYS- 356
            ..:...|     .|:|  |::|.|:.|.::               .|...|:.|...|...||| 
Human   294 STTNIAGHFNDESPLGLRRILSQSTDSLNM---------------RNRTLSVESLIDEAEVIYSE 343

  Fly   357 -----EDDEKVYEDLCYVTFQAKAKPEVTTDNIACNGTGYDHTNTKEEEVYQDLCALHRTSRSQT 416
                 |.|||.:         |.....:..|      :.:...:.||....||            
Human   344 LMSDFEMDEKDF---------AADSWSLAVD------SSFLQQHKKEVMKQQD------------ 381

  Fly   417 ASSTSFEQRDYVIRELIDTESNYLDVLTALKTKF-MGPLER-HLNQDELRLIFPRIRELVDIHTK 479
                       ||.|||.||.:::..|..:...| .|.||. ||....::.:||.:.||.||||:
Human   382 -----------VIYELIQTELHHVRTLKIMTRLFRTGMLEELHLEPGVVQGLFPCVDELSDIHTR 435

  Fly   480 FLDKL----RESLTPNAKVKMAQVFLDFREPFLI---------------YGEFCSLLLGAIDYLA 525
            ||.:|    |::|.|.:    .:.|:..|...|:               |.||||....|:....
Human   436 FLSQLLERRRQALCPGS----TRNFVIHRLGDLLISQFSGPSAEQMCKTYSEFCSRHSKALKLYK 496

  Fly   526 DVCKKNQIIDQLVQKCERDYNVGKLQLRDILSVPMQRILKYHLLLDKLVKETSPLHDDYRSLERA 590
            ::..:::...|.::|..|...:.:..:::.:.:..|||.||.||:.::::.:..:.::.:.|..|
Human   497 ELYARDKRFQQFIRKVTRPAVLKRHGVQECILLVTQRITKYPLLISRILQHSHGIEEERQDLTTA 561

  Fly   591 ----KEAMIDVSQYINEVKRDS-------------------------DHLVIIQKVKDSICDIHL 626
                ||.:.:|.:.|.::::.:                         :.|:..:.:.|. |.:..
Human   562 LGLVKELLSNVDEGIYQLEKGARLQEIYNRMDPRAQTPVPGKGPFGREELLRRKLIHDG-CLLWK 625

  Fly   627 LQNGNGSDLLQYGRLLLDGELHIKAHEDQK-----------TKLRYAFVFD-----KILIMVKA- 674
            ...|...|:|.   ||:...|.....:|||           ..|:...|.|     |.:.::.| 
Human   626 TATGRFKDVLV---LLMTDVLVFLQEKDQKYIFPTLDKPSVVSLQNLIVRDIANQEKGMFLISAA 687

  Fly   675 ------LHIKTGDMQYTYRDSHNLADYRVEQSHSRRTIGRD-------------TRFKYQL---- 716
                  :|..:.|.:.|:        .||.|...|....|:             .|.|.:|    
Human   688 PPEMYEVHTASRDDRSTW--------IRVIQQSVRTCPSREDFPLIETEDEAYLRRIKMELQQKD 744

  Fly   717 -----LLARKSGKTAFTLYLKSEHE-----------RDKWRKALTEAMESLEPP 754
                 ||..|.|..|...:.::|.:           |..:|.      ||||.|
Human   745 RALVELLREKVGLFAEMTHFQAEEDGGSGMALPTLPRGLFRS------ESLESP 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723 9/38 (24%)
RhoGEF 428..603 CDD:279015 53/199 (27%)
PH_Vav 624..753 CDD:269930 36/184 (20%)
PH 641..749 CDD:278594 30/163 (18%)
C1_1 761..804 CDD:278556
SH2_Vav_family 824..934 CDD:198193
SH3 940..993 CDD:302595
ARHGEF2XP_011508441.1 C1 183..228 CDD:237996 9/50 (18%)
RhoGEF 379..573 CDD:238091 53/220 (24%)
PH_ARHGEF2 613..728 CDD:275428 24/126 (19%)
PH 616..714 CDD:278594 22/109 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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