DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and Akap13

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_036009413.1 Gene:Akap13 / 75547 MGIID:2676556 Length:2817 Species:Mus musculus


Alignment Length:538 Identity:104/538 - (19%)
Similarity:217/538 - (40%) Gaps:116/538 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 ARQSQSPLAAAAPSVPVSAAPGPPMGRLVSTSSSSSSLLVSESQRLQRAAAAVYNYRSSMASTEH 349
            ::..:.|.:|...:...:|||      :.:...|..|:.:|:|..:|.....  ....:|::|  
Mouse  1872 SQPKERPRSAVLLADEATAAP------MFTNRRSQQSVSLSKSVSIQNITGV--GNDENMSNT-- 1926

  Fly   350 EYAYIYSEDDEKVYEDLCYVTFQAKAKPEVTTDNIACNGTGYDHTNTKEEEVYQDLCA----LHR 410
             :.::....|.  ...:|        |...:|:::...|.|   |:..|.::..|..:    |..
Mouse  1927 -WKFLSHSTDS--LNKIC--------KVNESTESLTDEGVG---TDMNEGQLMGDFESDSKQLEA 1977

  Fly   411 TSRSQTASSTSFEQ-------RDYVIRELIDTESNYLDVLTALKTKFMGPLERHL--NQDELRLI 466
            .|.|:|..|...:|       |..||.||:.||.:::..|..:...:...:...|  .|..:..:
Mouse  1978 ESWSRTVDSKFLKQQKKDVVKRQEVIYELMQTELHHIRTLKIMSDVYSRGMMTDLLFEQQMVEKL 2042

  Fly   467 FPRIRELVDIHTKF----LDKLRESLTPNAKVKMAQVFLDFREPFLI------------------ 509
            ||.:.||:.||::|    |::.:|||...::           :.|||                  
Mouse  2043 FPCLDELISIHSQFFQRILERKKESLVDKSE-----------KNFLIKRIGDVLVSQFSGESAER 2096

  Fly   510 ----YGEFCSLLLGAIDYLADVCKKNQIIDQLVQKCERDYNVGKLQLRDILSVPMQRILKYHLLL 570
                ||:||.....:::|..|:..|::.....|:|......|.:|.:.:.:.:..|||.||.:|.
Mouse  2097 LKKTYGKFCGQHNQSVNYFKDLYTKDKRFQAFVKKKMSSSVVRRLGIPECILLVTQRITKYPVLF 2161

  Fly   571 DKLV---KETSPLHDDY-RSLERAKEAM--ID--VSQY-----INEVKRDSDHLVIIQKVKDSIC 622
            .:::   |:.....:|. :||...|:.:  :|  |:.|     :.|:...:|...|::       
Mouse  2162 QRILQCTKDNEVEQEDLTQSLSLVKDVIGAVDSKVASYEKKVRLGEIYTKTDSKSIMR------- 2219

  Fly   623 DIHLLQNGN--GSDLLQYGRLLLDGELHIKAHEDQKTKLRYAFVFDKILIMVKALHIKTGDMQYT 685
                :::|.  ..:.|:..:|:.||.:.:|:...:..:::...:.| ||:.     ::..|.:|.
Mouse  2220 ----MKSGQMFAKEDLRRKKLVRDGSVFLKSTTGRLKEVQAVLLTD-ILVF-----LQEKDQKYV 2274

  Fly   686 YRDSHNLADYRVEQSHSRRTIGRDTRFKYQLLLARKSG---KTAFTLYLKSEHERDKWRKALTEA 747
            :..    .|::......::.|.|:...:.:.|.....|   .....::..|..||:.|.:.:.:.
Mouse  2275 FAS----LDHKSTVISLKKLIVREVAHEEKGLFLISMGVKDPEMVEVHASSREERNSWIQIIQDT 2335

  Fly   748 MESL---EPPGCQSTDHK 762
            :.||   |..|..|.:.:
Mouse  2336 INSLNRDEDEGIPSENEE 2353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723
RhoGEF 428..603 CDD:279015 48/215 (22%)
PH_Vav 624..753 CDD:269930 22/136 (16%)
PH 641..749 CDD:278594 18/110 (16%)
C1_1 761..804 CDD:278556 0/2 (0%)
SH2_Vav_family 824..934 CDD:198193
SH3 940..993 CDD:302595
Akap13XP_036009413.1 opacity_OapA <1150..>1298 CDD:411470
C1_AKAP13 1792..1848 CDD:410428
RhoGEF 1999..2193 CDD:238091 46/204 (23%)
PH_AKAP13 2236..2338 CDD:275427 18/111 (16%)
SMC_prok_B <2519..2674 CDD:274008
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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