DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vav and vav2

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_031746376.1 Gene:vav2 / 733982 XenbaseID:XB-GENE-6067166 Length:914 Species:Xenopus tropicalis


Alignment Length:1162 Identity:279/1162 - (24%)
Similarity:445/1162 - (38%) Gaps:443/1162 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WRECVAWLTRCKVIPPDHKAAQPDAEIRILAMTLRDGVLLCNLVIHLDPSSLDPREFNRKPQMAQ 85
            ||:|..||..|||:|.||:...|.|.:..||..||||||||.|:.:|.|.|:|.::.|.:|||:|
 Frog     5 WRQCGRWLIDCKVLPVDHRVVWPSAVVFDLAQALRDGVLLCQLLHNLSPGSIDLKDINFRPQMSQ 69

  Fly    86 FLCSKNIKLFLDVCHNNFGIRDADLFEPTMLYDLTNFHRVLITLSKLSQCRKVQQLHPDLIGFNL 150
            |||.|||:.||.|||:.||:|:.|||:|..|:|:.:|.:|:..|||:|                 
 Frog    70 FLCLKNIRTFLKVCHDKFGLRNCDLFDPFDLFDVRDFGKVIAALSKVS----------------- 117

  Fly   151 QLSPTERSHSDEAIYKDLHSTDLNMRKTSSIDASASSSAEYYDRTSQSGSLDENSDITIENGTED 215
                                                    |::.....|.....|:.|.||    
 Frog   118 ----------------------------------------YHNIAQTKGIRPFPSEDTAEN---- 138

  Fly   216 IDDYIEDSLSNMCDSTIDNDAEDAGVETPLLSDCQGSHVRELSFDLALDVVSSTTDGASNAVTPT 280
             ||.|..||..:.|                                                   
 Frog   139 -DDDIYRSLEELAD--------------------------------------------------- 151

  Fly   281 PESYARQSQSPLAAAAPSVPVSAAPGPPMGRLVSTSSSSSSLLVSESQRLQRAAAAVYNYRSSMA 345
                                                                             
 Frog   152 ----------------------------------------------------------------- 151

  Fly   346 STEHEYAYIYSEDDEKVYEDLCYVTFQAKAKPEVTTDNIACNGTGYDHTNTKEEEVYQDLCALHR 410
              ||:    ..|:|                     |.::.|          :|:::|:|:..:..
 Frog   152 --EHD----LGEND---------------------TYDVPC----------EEDDIYEDIIKVEN 179

  Fly   411 TS----RSQTASSTSFEQRDYVIRELIDTESNYLDVLTALKTKFMGPLERHLNQDELRLIFPRIR 471
            ..    ..|....|..::|:..:.|:.:||..|...|..:||.:|.||::.|:..|:..||..:.
 Frog   180 QQPMIRYMQKMGMTEDDKRNCCLLEIRETEDRYYRTLEDIKTYYMIPLKQILSVQEISTIFINLE 244

  Fly   472 ELVDIHTKFLDKLRESLTPNAKVKMAQVFLDFREPFLIYGEFCSLLLGAIDYLADVCKKNQIIDQ 536
            ||:.:|..||..:..|:...... :.|||||::|..|||||:||    .|:|      ..:.:||
 Frog   245 ELIKVHFNFLRTIELSVMSGGST-IGQVFLDYKEKLLIYGEYCS----HIEY------SQKTLDQ 298

  Fly   537 LV----------QKCERDYNVGKLQLRDILSVPMQRILKYHLLLDKLVKET--SPLHDDYRSLER 589
            |:          ::|......||.:|:|:|.:||||:|||||||.:|:..|  ||   :.::|:.
 Frog   299 LIATREDVRTKLEECSLKVQEGKFKLQDLLVIPMQRVLKYHLLLKELLSHTADSP---ERQTLKE 360

  Fly   590 AKEAMIDVSQYINEVKRDSDHLVIIQKVKDSICDIHLLQNGNGSDLLQYGRLLLDGELHIKAHED 654
            |.:||.|::.||||||||.:.|..|.:.::||.::.:       :|.::||..:||||.:::..:
 Frog   361 ALDAMQDLAMYINEVKRDKETLKKISEFQNSIENLQV-------NLEEFGRPKIDGELKVRSMVN 418

  Fly   655 QKTKLRYAFVFDKILIMVKALHIKTGDMQYTYRDS-------HNLADYRVEQSHSRRTIGRDTRF 712
            |..:.||.|:|||::|:.|    :.|   |.|...       |.::|..:.....:::.|:  .:
 Frog   419 QAKQDRYLFLFDKVVIVCK----RRG---YNYELKEIIELLCHKMSDDPMNNKDVKKSHGK--MW 474

  Fly   713 KYQLLLARKSGKTAFTLYLKSEHERDKWRKALTEAMESLEPPGCQSTDHKMEIYTFDAPTTCRHC 777
            .|...|....||..|..:.|:|..:.||.:....||.:::|....:..|..:::|||..|.|:.|
 Frog   475 SYGFFLIHLQGKQGFQFFCKTEEMKRKWMEQFEMAMSNIKPDKANANHHNFQMFTFDKTTNCKAC 539

  Fly   778 SKFLKGRIHQGYRCKVCQISVHKGCISSTGRCK-------------------------------- 810
            ..||:|..:|||.|..|.:.|||.|:.:...||                                
 Frog   540 KMFLRGTFYQGYFCSRCGVGVHKECLETIHACKIGGSTDDVDSLITVSGGRTLPCRTQQKMRSAV 604

  Fly   811 -----------------------------QN---------------------------------- 812
                                         ||                                  
 Frog   605 TNDFSGLLRNSSCNLINLKCYQGPKMVAVQNYFGNPAPPGKPVLTFQKDDVIELLRGDPNSQWWE 669

  Fly   813 ------------------PVSVPPPVCDRQLSEFNWFAGNMDRETAAHRLENRRIGTYLLRVRPQ 859
                              |..|.|.|.....|::.|||||::|..|.:.|:....||||:|.|| 
 Frog   670 GRLLLTKKSGYFPSSSVEPCPVEPLVIRSDYSKYPWFAGNVERPQADNLLKGHVSGTYLIRERP- 733

  Fly   860 GPSTAHETMYALSLKTDDNVIKHMKINQENSGDSMLYCLSSRRHFKTIVELVSYYERNDLGENFA 924
                |....:|:|:|.:|.| ||:|:.::|:    ...::..:.|::::|||.||:.:.|.|:|.
 Frog   734 ----AEAERFAISIKFNDEV-KHIKVVEKNN----WIHITEAKKFESLLELVEYYQTHSLKESFK 789

  Fly   925 GLNQSLQWPYK---------------------------------------------------EVI 938
            .|:.:|::|||                                                   ..:
 Frog   790 QLDTTLKYPYKSRTGRSSSSSSSNTPRAPASCASYNFSFLSPQGLNFPCQNPSTPFWSVFTPRPV 854

  Fly   939 ATALYDYEPKA-GSNQLQLRTDCQVLVIGKDGDSKGWWRGKIGDTVGYFPKEYVQEQ 994
            .||:..|...| ...:|.||....|.:..:.|..:|||:|:....:|:||..||:|:
 Frog   855 GTAIARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVEEE 911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723 57/110 (52%)
RhoGEF 428..603 CDD:279015 66/186 (35%)
PH_Vav 624..753 CDD:269930 33/135 (24%)
PH 641..749 CDD:278594 29/114 (25%)
C1_1 761..804 CDD:278556 19/42 (45%)
SH2_Vav_family 824..934 CDD:198193 37/109 (34%)
SH3 940..993 CDD:302595 18/53 (34%)
vav2XP_031746376.1 CH_VAV2 3..121 CDD:409112 60/172 (35%)
RhoGEF 201..373 CDD:395496 65/185 (35%)
PH_Vav 388..515 CDD:269930 35/142 (25%)
C1_VAV2 518..575 CDD:410418 21/56 (38%)
SH3_VAV2_1 629..688 CDD:212913 2/58 (3%)
SH2_Vav2 699..801 CDD:198269 39/111 (35%)
SH3_VAV2_2 855..912 CDD:212910 19/57 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 123 1.000 Domainoid score I5504
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 452 1.000 Inparanoid score I1566
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313065at33208
OrthoFinder 1 1.000 - - FOG0001414
OrthoInspector 1 1.000 - - otm48207
Panther 1 1.100 - - O PTHR45818
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 1 1.000 - - X1295
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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