DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vav and TIAM1

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001340617.1 Gene:TIAM1 / 7074 HGNCID:11805 Length:1591 Species:Homo sapiens


Alignment Length:731 Identity:156/731 - (21%)
Similarity:258/731 - (35%) Gaps:257/731 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 LIGFNLQL---SPTERSHSDEAIYKDLHSTDLNMRKTSSIDASAS-SSAEYYDRTSQSGSLD--- 202
            ||...:||   .|.|..:  |.:||::   ::..:.|.||....| ::|:.|..:..|...|   
Human   812 LIENKMQLYVPQPEEDIY--ELLYKEI---EICPKVTQSIHIEKSDTAADTYGFSLSSVEEDGIR 871

  Fly   203 -------ENSDITIENGTEDIDDYIEDSLSNMCDSTIDNDAEDAGVETPLLSDCQGSHVRELSFD 260
                   :.:.:..:.|.:..|:.:|          |:|.|.|| :.:.:|.|    .:.:.|..
Human   872 RLYVNSVKETGLASKKGLKAGDEILE----------INNRAADA-LNSSMLKD----FLSQPSLG 921

  Fly   261 LALDVVSSTTDGASNAVTP--TPESYARQSQSPLAAAAPSVPVSAAPGPPMGRLVSTSSSSSSLL 323
            |.:.......:|.....:|  ..:..|...:||||.      :::.||   ..|.|...||    
Human   922 LLVRTYPELEEGVELLESPPHRVDGPADLGESPLAF------LTSNPG---HSLCSEQGSS---- 973

  Fly   324 VSESQRLQRAAAAVYNYRSSMASTEHEYAYIYSEDDEKVYEDLCYVTFQAKAKPEVTTDNIACNG 388
                              :..|..|.|...:.|.|:.                            
Human   974 ------------------AETAPEETEGPDLESSDET---------------------------- 992

  Fly   389 TGYDHTNTKEEEVYQDLCALHRTSRS------------QTASSTSFEQRD---YVIRELIDTESN 438
               ||::...|:|.....:||..:.|            |.|:.......|   .||.||::||..
Human   993 ---DHSSKSTEQVAAFCRSLHEMNPSDQSPSPQDSTGPQLATMRQLSDADKLRKVICELLETERT 1054

  Fly   439 YLDVLTALKTKFMGPLERH--LNQDELRLIFPRIRELVDIHTKFLDKLRES--LTPNAKVKMAQV 499
            |:..|..|..:::.||::.  |.||||.::|..:.|:|:...:||..|.:.  |.|:.: |:.:|
Human  1055 YVKDLNCLMERYLKPLQKETFLTQDELDVLFGNLTEMVEFQVEFLKTLEDGVRLVPDLE-KLEKV 1118

  Fly   500 -------------FLDFREPFLIYGEFCSLLLGAIDYLADVCKKNQIIDQLVQ-------KCERD 544
                         ||.:.:.|.:|..||:             ...::...||:       |...|
Human  1119 DQFKKVLFSLGGSFLYYADRFKLYSAFCA-------------SHTKVPKVLVKAKTDTAFKAFLD 1170

  Fly   545 YNVGKLQ----LRDILSVPMQRILKYHLLLDKLVKETSPLHDDYRSLERAKEAMIDVSQYINEVK 605
            ....|.|    |...|..|:||||||.|||.:|...|....:::..|:.|.:.|..|:.:|||::
Human  1171 AQNPKQQHSSTLESYLIKPIQRILKYPLLLRELFALTDAESEEHYHLDVAIKTMNKVASHINEMQ 1235

  Fly   606 RDS-------DHLVIIQK-VKDSICDIHLLQNGNGSDLLQY------------GRLLLDGELHIK 650
            :..       |.|:..|. .|..:.|:.:      .|||.:            |:...:.||   
Human  1236 KIHEEFGAVFDQLIAEQTGEKKEVADLSM------GDLLLHTTVIWLNPPASLGKWKKEPEL--- 1291

  Fly   651 AHEDQKTKLRYAFVFDKILIMVKALHIKTGDMQYTYRD----------SHNLADYR--------- 696
                      .||||...:::|             |:|          ||.|:.|.         
Human  1292 ----------AAFVFKTAVVLV-------------YKDGSKQKKKLVGSHRLSIYEDWDPFRFRH 1333

  Fly   697 ----------------------VEQSHSR-RTIGRDTRFKYQLLLARKSGKTAFTLYLKSEHE-- 736
                                  .|..|.: .:.||..|..:....:.:|.|.    :||:.|.  
Human  1334 MIPTEALQVRALASADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKD----FLKAVHSIL 1394

  Fly   737 RDKWRKAL--TEAMES 750
            |||.|:.|  ||::.|
Human  1395 RDKHRRQLLKTESLPS 1410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723
RhoGEF 428..603 CDD:279015 57/202 (28%)
PH_Vav 624..753 CDD:269930 35/185 (19%)
PH 641..749 CDD:278594 30/153 (20%)
C1_1 761..804 CDD:278556
SH2_Vav_family 824..934 CDD:198193
SH3 940..993 CDD:302595
TIAM1NP_001340617.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..78
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..379
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 393..422
PH1_Tiam1_2 432..558 CDD:269937
TIAM1_RBD 766..841 CDD:176413 9/33 (27%)
PDZ_signaling 846..925 CDD:238492 18/93 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 939..1034 26/156 (17%)
RhoGEF 1044..1233 CDD:214619 57/202 (28%)
PH2_Tiam1_2 1235..1406 CDD:269957 37/206 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1456..1482
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.