Sequence 1: | NP_001097030.1 | Gene: | Vav / 32920 | FlyBaseID: | FBgn0040068 | Length: | 1001 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001062249.1 | Gene: | She / 685088 | RGDID: | 1583215 | Length: | 500 | Species: | Rattus norvegicus |
Alignment Length: | 376 | Identity: | 80/376 - (21%) |
---|---|---|---|
Similarity: | 126/376 - (33%) | Gaps: | 126/376 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 570 LDKL----VKETSPLHDDY------------RSLERAKE-----AMIDVSQYINEVKR--DSDHL 611
Fly 612 VIIQKVKDSICD-------IHLLQNGNGSDLLQYGRLLLDGELHIKAHEDQKTKLRYAFVFDKIL 669
Fly 670 IMVKALHIKTGDMQYTYRDSHNLADYRVEQSHSRRTIGRDTRFKYQLLLARKSGKTAFTLYLKSE 734
Fly 735 HERDKWRKALTEAME-SLEPPGCQSTDHKMEIYTFDAPTTCRHCSKFLKGRIHQGYRCKVCQISV 798
Fly 799 HKGCISSTGRCKQNPVSVPPPVCDRQLSEFNWFAGNMDRETAAHRLENRRIGTYLLRVRPQGPST 863
Fly 864 AHETMYALSLKTDDNVIKHMKINQENSGDSMLYCLSSRRHFKTIVELVSYY 914 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vav | NP_001097030.1 | CH | 20..132 | CDD:278723 | |
RhoGEF | 428..603 | CDD:279015 | 13/53 (25%) | ||
PH_Vav | 624..753 | CDD:269930 | 24/129 (19%) | ||
PH | 641..749 | CDD:278594 | 18/107 (17%) | ||
C1_1 | 761..804 | CDD:278556 | 4/42 (10%) | ||
SH2_Vav_family | 824..934 | CDD:198193 | 26/91 (29%) | ||
SH3 | 940..993 | CDD:302595 | |||
She | XP_001062249.1 | SH2_SHE | 399..496 | CDD:198254 | 25/87 (29%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |