DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and She

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_001062249.1 Gene:She / 685088 RGDID:1583215 Length:500 Species:Rattus norvegicus


Alignment Length:376 Identity:80/376 - (21%)
Similarity:126/376 - (33%) Gaps:126/376 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   570 LDKL----VKETSPLHDDY------------RSLERAKE-----AMIDVSQYINEVKR--DSDHL 611
            |||.    .::|..:.:||            |..||..|     ...|..|.|.|::|  ..|.|
  Rat   197 LDKTKIMRQQDTVIILEDYADPYDAKRTKGQRDAERVGENDGYMEPYDAQQMITEIRRRGSKDPL 261

  Fly   612 VIIQKVKDSICD-------IHLLQNGNGSDLLQYGRLLLDGELHIKAHEDQKTKLRYAFVFDKIL 669
            |...::.|..|:       ....:..:..|||  |:   ..:|:...:|..:..||.|       
  Rat   262 VKALQLLDGPCEPGETMKVEATAKRRSSKDLL--GK---PPQLYDTPYEPSEGDLRAA------- 314

  Fly   670 IMVKALHIKTGDMQYTYRDSHNLADYRVEQSHSRRTIGRDTRFKYQLLLARKSGKTAFTLYLKSE 734
             .|||   :..|.:....|....|:|  ||..                                |
  Rat   315 -EVKA---RPADGRLPEEDDRPAAEY--EQPW--------------------------------E 341

  Fly   735 HERDKWRKALTEAME-SLEPPGCQSTDHKMEIYTFDAPTTCRHCSKFLKGRIHQGYRCKVCQISV 798
            .:|::..:||:...| |...||.:.....            :|..|.|                 
  Rat   342 WKREQIARALSVQFEGSDRSPGREEAGRP------------QHWQKTL----------------- 377

  Fly   799 HKGCISSTGRCKQNPVSVPPPVCDRQLSEFNWFAGNMDRETAAHRLENRRIGTYLLRVRPQGPST 863
             |..:|..|    :...|.|.:.   |.:..|:.|::.|..|..||:..:...||:|....|.| 
  Rat   378 -KPTLSDHG----DGEKVDPGLA---LEKQPWYHGSISRAEAESRLQPCKEAGYLVRNSESGNS- 433

  Fly   864 AHETMYALSLKTDDNVIKHMKINQENSGDSMLYCLSSRRHFKTIVELVSYY 914
                .|:::|||....: |:.:.|  :.||......:...|.:|.|:|.||
  Rat   434 ----KYSIALKTSQGCV-HIIVAQ--TKDSRYTLNQTSAVFDSIPEVVHYY 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723
RhoGEF 428..603 CDD:279015 13/53 (25%)
PH_Vav 624..753 CDD:269930 24/129 (19%)
PH 641..749 CDD:278594 18/107 (17%)
C1_1 761..804 CDD:278556 4/42 (10%)
SH2_Vav_family 824..934 CDD:198193 26/91 (29%)
SH3 940..993 CDD:302595
SheXP_001062249.1 SH2_SHE 399..496 CDD:198254 25/87 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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