DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and PLEKHG1

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001316727.1 Gene:PLEKHG1 / 57480 HGNCID:20884 Length:1444 Species:Homo sapiens


Alignment Length:551 Identity:136/551 - (24%)
Similarity:237/551 - (43%) Gaps:126/551 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 STTDG------ASNAVT--PTPESYAR----QSQSPLAAAAPSVPVSAAPGPPMGRLVSTSSSSS 320
            |.|||      ..:|||  |.|::.||    |....:..:....|||..         |||||:|
Human    24 SITDGHQLRLEVPSAVTKVPHPKTTARRSCPQELKTMELSDSDRPVSFG---------STSSSAS 79

  Fly   321 SLLVSESQRLQRAAAAVYNYRSSMASTEHEYAYIYSEDDEKVYEDLCYVTFQAKAKPEVTTDNIA 385
            |          |.:...:..|.::.|..|  ..::::|.|.....|..:..:..:..|:..||.|
Human    80 S----------RDSHGSFGSRMTLVSNSH--MGLFNQDKEVGAIKLELIPARPFSSSELQRDNPA 132

  Fly   386 CNGTGYDHTNTKEEEVYQDLCALHRTSRSQ--------------TASSTSFEQRDYVIRELIDTE 436
               ||..:.:...|          |..|:|              :|:|......|.|::|:::||
Human   133 ---TGQQNADEGSE----------RPPRAQWRVDSNGAPKTIADSATSPKLLYVDRVVQEILETE 184

  Fly   437 SNYLDVLTALKTKFMGPLERH----LNQDELRLIFPRIRELVDIHTKFLDKLRESLTPNAKVKMA 497
            ..|:..|.::...::..:...    |..:|...:|..|:::...:::.|..|..  ..|..|.:|
Human   185 RTYVQDLKSIVEDYLDCIRDQTKLPLGTEERSALFGNIQDIYHFNSELLQDLEN--CENDPVAIA 247

  Fly   498 QVFLDFREPFLIYGEFCSLLLGAIDYLADVCKKNQIIDQLVQKCERDYNV-GKLQLRDILSVPMQ 561
            :.|:...|.|.||.::|:....::..|.: |.:|:|:.:..:  ||...: ..|.|...|..|:|
Human   248 ECFVSKSEEFHIYTQYCTNYPRSVAVLTE-CMRNKILAKFFR--ERQETLKHSLPLGSYLLKPVQ 309

  Fly   562 RILKYHLLLDKLVKETSPLHDDYRSLERAKEAMIDVSQYINEVKRDSDHLVIIQKVKDSICDIHL 626
            |||||||||.::........:.|..:..|.:.|..|:.:||::||..:|.|.:|:::.      |
Human   310 RILKYHLLLHEIENHLDKDTEGYDVVLDAIDTMQRVAWHINDMKRKHEHAVRLQEIQS------L 368

  Fly   627 LQNGNGSDLLQYGRLLLDGELHIKAHEDQKTKLRYAFVFDKILIMVKALHIKTGDMQYTYRDSHN 691
            |.|..|.||..||.|:|:|...|:..::::|    .|:|||:|::.     |..|..:||: :|.
Human   369 LTNWKGPDLTSYGELVLEGTFRIQRAKNERT----LFLFDKLLLIT-----KKRDDTFTYK-AHI 423

  Fly   692 LAD--YRVEQSHSRRTIGRD----TRFKYQLLLARKSGKTAFTLYLKSEHERDKW---------- 740
            |..  ..||      .|.::    :.|.|      |:.|...|:..||:.::..|          
Human   424 LCGNLMLVE------VIPKEPLSFSVFHY------KNPKLQHTVQAKSQQDKRLWVLHLKRLILE 476

  Fly   741 ----------RKALTEAMESLEPPG-CQSTD 760
                      ::|:.| |:::..|| |.|.:
Human   477 NHAAKIPAKAKQAILE-MDAIHHPGFCYSPE 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723
RhoGEF 428..603 CDD:279015 46/179 (26%)
PH_Vav 624..753 CDD:269930 38/154 (25%)
PH 641..749 CDD:278594 29/133 (22%)
C1_1 761..804 CDD:278556 136/551 (25%)
SH2_Vav_family 824..934 CDD:198193
SH3 940..993 CDD:302595
PLEKHG1NP_001316727.1 RhoGEF 176..351 CDD:279015 46/179 (26%)
PH_PLEKHG1_G2_G3 332..477 CDD:270063 46/172 (27%)
PH 381..474 CDD:278594 28/114 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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