DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and plekhn1

DIOPT Version :10

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_697734.4 Gene:plekhn1 / 569267 ZFINID:ZDB-GENE-090313-357 Length:700 Species:Danio rerio


Alignment Length:580 Identity:104/580 - (17%)
Similarity:171/580 - (29%) Gaps:225/580 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 SSSSLLVSESQRLQRAAAAVYNYRSSMASTEHEYAYIYSEDDEKVYEDLCYVTFQAKAKPE--VT 380
            ||.|.:...|.||.|                .:|.....|....:...||.||.:.:..|:  .|
Zfish    16 SSKSFIRRNSSRLFR----------------KKYPQEGQEKSNSIINILCTVTPRKEMSPKDLQT 64

  Fly   381 TDNI---------ACNGTGYDHTNTKEEEVYQDLCALHRTSRSQTASSTSFEQRDYVIRELIDTE 436
            .:||         ..:|......|.|                                       
Zfish    65 IENIKWDPPFPYDPASGWKKSSINVK--------------------------------------- 90

  Fly   437 SNYLDVLTALKTKFMGPLERHLNQDELRLIFPRIRELVDIHTKFLDKLRESLTPN---------- 491
             ||..::.:.|.:|     |.|:..::...:   .:|...|..|:......||..          
Zfish    91 -NYGRMIHSSKVRF-----RFLHCQDVHDCY---LDLFQTHLHFVSNNTTGLTYQGTLPLKELTI 146

  Fly   492 AKVKMAQVFLDFRE-----------PFLIYGEFCS----------LLLGAIDYLADVCKKNQIID 535
            .||:....|.|.:|           |.::|   ||          ||...|:.........:...
Zfish   147 CKVQNRNSFGDLQEFAFQINGVSLNPIIVY---CSTEEEMNNWFGLLKEQIEANGGNAIAQETYT 208

  Fly   536 QLVQKCERDYNVGKLQLRDILSVPMQRILKYHLLLDKLVKETSPLHDDYRSLERAKEAMIDVSQY 600
            ::..:|..:..|||.:||:.:|                 ||  |:::    .|.::...:....|
Zfish   209 RVKLQCSEETTVGKEELRNSIS-----------------KE--PIYE----WEGSQRESLGPITY 250

  Fly   601 INEVK-------RDSDHLVIIQKVKDSICDIHLLQNGNGSDLLQY-GRLLLDGELHIKAHEDQKT 657
            :.:||       ...|.|:::.       ..:|:.....||.|.| |:|.|:........:|.|.
Zfish   251 VTKVKLQHMPCQEQYDRLLVLY-------PNYLIILSEESDGLFYKGKLPLNMITVTTPCQDIKP 308

  Fly   658 KLRYAFVFD-KIL--IMVKALHIKTGDMQYTYRDSHNLADYRVEQSHSRRTIGRDTRFK------ 713
            .   .|:.: |::  |:|..|:         ..:.|:...|                ||      
Zfish   309 N---TFMIEGKLINPIIVSCLN---------KSEFHDWIQY----------------FKNADVPI 345

  Fly   714 -------YQLLLARKSGKTAFTLYLKSEHERDKWRKALTEAMESLEPPGCQSTDHKMEIYTFDAP 771
                   |.::         :|...|...|.|:| .|.:..:.  |||    ...|...|....|
Zfish   346 LSPPPPVYDII---------YTPTQKQAPELDRW-SASSHGVS--EPP----KQDKRRSYDLQLP 394

  Fly   772 TTCRHCSKFLKGRIHQGYRCKVC-----------QISVHKGCISSTGRCKQNPVSVPPPV 820
            :..       :..|..||...:|           |.|.|.|..||:...:..||....|:
Zfish   395 SAD-------ENPISPGYAEPLCFISSRPTSSDTQYSAHLGSRSSSFSSRVRPVPDHRPI 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH_VAV 19..135 CDD:409050
RhoGEF 428..602 CDD:459876 35/204 (17%)
PH_Vav 624..753 CDD:269930 26/145 (18%)
C1_VAV 759..810 CDD:410360 13/61 (21%)
SH2_Vav_family 824..934 CDD:198193
SH3 940..993 CDD:473055
plekhn1XP_697734.4 PH-like 96..196 CDD:473070 21/110 (19%)
PH_PLEKHN1 242..362 CDD:270132 26/163 (16%)
Blue background indicates that the domain is not in the aligned region.

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