Sequence 1: | NP_001097030.1 | Gene: | Vav / 32920 | FlyBaseID: | FBgn0040068 | Length: | 1001 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009290006.1 | Gene: | arhgef12a / 562455 | ZFINID: | ZDB-GENE-121017-3 | Length: | 1357 | Species: | Danio rerio |
Alignment Length: | 600 | Identity: | 131/600 - (21%) |
---|---|---|---|
Similarity: | 229/600 - (38%) | Gaps: | 116/600 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 263 LDVVSSTTDGASNAVTPTPESYARQSQSPLAAAAPSVPVSAAPGPPMGRL-VSTSSSSSSLLVSE 326
Fly 327 SQRLQRAAAAVYNYRSSMASTEHEYAY------------IYSEDD-EKVYEDLCYVTF------- 371
Fly 372 --QAKAKPEVTTDNIACNGTGYDHTNTKEEEVYQDLCA---LHRTSRSQTASSTSFE-QRDYVIR 430
Fly 431 ELIDTESNYLDVLTALKTKFMGPLERH--LNQDELRLIFPRIRELVDIHTKFLDKLRESLTPN-- 491
Fly 492 -------------------AKVKMAQVFLDFREPFLIYGEFCSLLLGAIDYLADVCKKNQIIDQL 537
Fly 538 VQKCERDYNVGKLQLRDILSVPMQRILKYHLLLDKLVKETSPLHDDYRSLERAKEAMIDVSQYIN 602
Fly 603 EVKRDSDHLVIIQKVKD--SICDIHLLQNGNGSDLLQYGRLLL-------DGELHIKAHEDQKTK 658
Fly 659 LRYAFVFDKILIMVK--------ALHIK----TGDMQYTYRDSHNLADYRVEQSHSRRTIGRDTR 711
Fly 712 FKYQLLLARKSGKTAFTLYLKSEHERDKWRKALTEAMESLEPPGCQSTDHK-MEIYTFDAPTTCR 775
Fly 776 HCSKFLKG--RIHQG 788 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vav | NP_001097030.1 | CH | 20..132 | CDD:278723 | |
RhoGEF | 428..603 | CDD:279015 | 49/197 (25%) | ||
PH_Vav | 624..753 | CDD:269930 | 26/147 (18%) | ||
PH | 641..749 | CDD:278594 | 24/126 (19%) | ||
C1_1 | 761..804 | CDD:278556 | 9/30 (30%) | ||
SH2_Vav_family | 824..934 | CDD:198193 | |||
SH3 | 940..993 | CDD:302595 | |||
arhgef12a | XP_009290006.1 | PDZ_signaling | 66..140 | CDD:238492 | |
RGS | 308..524 | CDD:295367 | |||
RhoGEF | 743..928 | CDD:279015 | 49/197 (25%) | ||
PH-like | 947..1083 | CDD:302622 | 26/143 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |