DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and mcf2a

DIOPT Version :10

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_685307.7 Gene:mcf2a / 557201 ZFINID:ZDB-GENE-030616-52 Length:1111 Species:Danio rerio


Alignment Length:569 Identity:123/569 - (21%)
Similarity:222/569 - (39%) Gaps:137/569 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 NTKEEEVYQDLCALHRTSRSQTASSTSFEQRD----YVIRELIDTESNYLDVLTALKTKF----- 450
            |:::.||..|    ::.|.|...|....:..|    :|::|||:||..|::.|.|:...:     
Zfish   581 NSRKIEVIHD----YQRSSSLPYSIDGEDSSDLLKRHVMKELIETERIYVEELLAVLLGYRAEMD 641

  Fly   451 ---MGPLERHLNQDELRLIFPRIRELVDIHTK-FLDKLRESL-TPNAKVKMAQVFLDFREPFLIY 510
               :.||.....:::..::|..:.::.:.|:. ||..|...| :|.|   :...||:.::.|.:|
Zfish   642 NPSLAPLLPTSLRNKRDVLFGNLPDIYNFHSSVFLQDLESCLESPEA---VGACFLERKDHFHLY 703

  Fly   511 GEFC-------SLLLGAIDYLADVCKKNQIID-QLVQKCERDYNVGKLQLRDILSVPMQRILKYH 567
            ..:|       ||.             .|..| ...|:|::... .||.|...|..|:||:.||.
Zfish   704 ECYCQNKPRSESLW-------------RQFSDCPFFQECQKKLE-HKLALDSYLLKPIQRLTKYQ 754

  Fly   568 LLLDKLVKETSPLHDDYRSLERAKEAMIDVSQYINEVKRDSDHLVIIQKVKDSICDIHLLQNGNG 632
            |||.:|:|.:|.. :....|:.|.|||:|:.:.:|    ||.|.:.|              .|..
Zfish   755 LLLKELLKYSSGC-ERVSELQGALEAMLDLLKSVN----DSMHQIAI--------------TGYE 800

  Fly   633 SDLLQYGRLLLDGELHI-KAHEDQKTKL----------RYAFVFDKILIMVKAL--HIKTGDMQY 684
            .||...||:|:.|...: ..|:...|::          |:.|:.:..|:..|..  |.:..|...
Zfish   801 GDLSDLGRVLMQGSFSVWIGHKKGPTRVKEMARFKPMQRHLFLHEHALLFCKRREEHGENADKTP 865

  Fly   685 TYRDSHNLADYRVEQSHSRRTIGRDTRFKYQLLLARKSGKTAFTLYLKSEHERDKW----RKALT 745
            :|...|.|   ::........:..|.: |:::..:.:  :..:.:...:...:..|    ||.||
Zfish   866 SYSFKHCL---KMSAVGITENVKGDVK-KFEIWYSGR--EEVYVIQAPTVEVKIAWLNEIRKILT 924

  Fly   746 EAMESLEPPGCQSTDHKMEIYTFDAPTTCRHCSKFLKGRIHQGYRCKVCQISVHKG--------C 802
            ...:.|:...|.||....::....:|..          .:.:..|..|.......|        |
Zfish   925 NQQKQLKEELCLSTAVSEQMQMQISPPL----------SVSKQQRASVSSDGTESGHSSPDAFSC 979

  Fly   803 ISSTGRCKQN----PVSVPPPVCDRQLSEFNWFAGN-------MDRETAAHRLENRRIGTYLLRV 856
            .|...|.:::    |.||  .:|:   ...:|...|       .:.|.|.|.:.    |.|.:.|
Zfish   980 SSQQQRNRRSWPGAPYSV--DICE---GLEDWSGANSLSNPSDTEEEDAVHLVP----GRYKVFV 1035

  Fly   857 --RPQGPSTAHETMYALSLKTDDNV-IKHMKINQENSGDSMLYCLSSRR 902
              |..|       :..|.:|..|.: ::|    :|:.|..::..||.|:
Zfish  1036 DWRNNG-------LDNLMIKCGDVIQLQH----EEDHGQWLVKNLSRRQ 1073

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH_VAV 19..135 CDD:409050
RhoGEF 428..602 CDD:459876 51/191 (27%)
PH_Vav 624..753 CDD:269930 26/145 (18%)
C1_VAV 759..810 CDD:410360 8/58 (14%)
SH2_Vav_family 824..934 CDD:198193 19/89 (21%)
SH3 940..993 CDD:473055
mcf2aXP_685307.7 None
Blue background indicates that the domain is not in the aligned region.

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