DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vav and PLCG1

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_005260495.1 Gene:PLCG1 / 5335 HGNCID:9065 Length:1330 Species:Homo sapiens


Alignment Length:807 Identity:158/807 - (19%)
Similarity:268/807 - (33%) Gaps:292/807 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 TKEEEVYQDLCALHRTSRSQTASSTSFEQRDYVIRELIDTESNYLDVLTALKTKFMGPLERHLNQ 460
            |.|:||...:..|.........:.|..:...::.::....:.|..|.::|...|.|      |:|
Human   125 TSEDEVNMWIKGLTWLMEDTLQAPTPLQIERWLRKQFYSVDRNREDRISAKDLKNM------LSQ 183

  Fly   461 DELRLIFPRIRELVDIHTKFLDKLRESLTPNAKVKMAQVFLDFREPFLIYGEFC----SLLLGA- 520
            ...|:  |.:|           .|||.||.          |:.|...:.||:|.    ||:..| 
Human   184 VNYRV--PNMR-----------FLRERLTD----------LEQRSGDITYGQFAQLYRSLMYSAQ 225

  Fly   521 ----IDYL----------ADVCKKNQIIDQLVQKCERDYN-----VGKLQLRD----ILSVPMQR 562
                :.:|          .::|:.:  :.:. |:...||.     |.:||:::    .|..|::.
Human   226 KTMDLPFLEASTLRAGERPELCRVS--LPEF-QQFLLDYQGELWAVDRLQVQEFMLSFLRDPLRE 287

  Fly   563 ILKYHLLLDKLV-----KETS----------------PL--------HDDYR-----SLERAKEA 593
            |.:.:..||:.|     ||.|                ||        |:.|.     |.|.:.||
Human   288 IEEPYFFLDEFVTFLFSKENSVWNSQLDAVCPDTMNNPLSHYWISSSHNTYLTGDQFSSESSLEA 352

  Fly   594 ----------------------------------MIDVSQYINEVKRD----SDHLVIIQKVKDS 620
                                              .|..|..::.:|..    |::.||: .::|.
Human   353 YARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTTKIKFSDVLHTIKEHAFVASEYPVIL-SIEDH 416

  Fly   621 ICDIHLLQNGNGSDLLQYGRLLLDGELHIKAHE------DQKTKLRYAFVFDKILIMVKAL---- 675
             |.|...:|     :.||.:.:|...|..|..|      ....:|:     .||||..|.|    
Human   417 -CSIAQQRN-----MAQYFKKVLGDTLLTKPVEISADGLPSPNQLK-----RKILIKHKKLAEGS 470

  Fly   676 ---HIKTGDMQYTYRDSHN--------LADYRVEQSHSRRTIGRDTRFKYQLLLARKSGKTAFTL 729
               .:.| .|.|:..|..|        |.|          .:..:....|.:|.:.|       :
Human   471 AYEEVPT-SMMYSENDISNSIKNGILYLED----------PVNHEWYPHYFVLTSSK-------I 517

  Fly   730 YLKSE----------------------HERDKW---------------RKALTE-AMESLEPPG- 755
            |...|                      |..:||               .:.||| .:|:..|.| 
Human   518 YYSEETSSDQGNEDEEEPKEVSSSTELHSNEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGS 582

  Fly   756 --CQSTDHKMEIYT--FDAPTTCRHCSKFLKGRIHQGYRCKVCQISVHKGCISST---------- 806
              .:.::..:..||  |......:||      |||........:..:....:..:          
Human   583 FLVRESETFVGDYTLSFWRNGKVQHC------RIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQQ 641

  Fly   807 --GRCKQNPVSVPPPVCDRQLSEF-NWFAGNMDRETAAHRLEN-RRIGTYLLRVRPQGPSTAHET 867
              .||.:..:.:..||......|. .|:..::.|..|.|.|.. .|.|.:|:|.|.:..|     
Human   642 VPLRCNEFEMRLSEPVPQTNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNS----- 701

  Fly   868 MYALSLKTDDNVIKHMKINQENSGDSMLYCLSSRRHFKTIVELVSYYERN--------------- 917
             ||:|.:.:.. |||.::.||  |.:::.   ....|.::|:|:||||::               
Human   702 -YAISFRAEGK-IKHCRVQQE--GQTVML---GNSEFDSLVDLISYYEKHPLYRKMKLRYPINEE 759

  Fly   918 ----------DLGENFAGLN-----QSLQWPYKEVIATALYDYEPKAGSNQLQLRTDCQVLVIGK 967
                      |.|..:.|.|     ::...|..:....||:||:.:.......:::   .::...
Human   760 ALEKIGTAEPDYGALYEGRNPGFYVEANPMPTFKCAVKALFDYKAQREDELTFIKS---AIIQNV 821

  Fly   968 DGDSKGWWRGKIGDTVG-YFPKEYVQE 993
            :....|||||..|.... :||..||:|
Human   822 EKQEGGWWRGDYGGKKQLWFPSNYVEE 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723
RhoGEF 428..603 CDD:279015 50/270 (19%)
PH_Vav 624..753 CDD:269930 34/187 (18%)
PH 641..749 CDD:278594 29/166 (17%)
C1_1 761..804 CDD:278556 8/44 (18%)
SH2_Vav_family 824..934 CDD:198193 32/141 (23%)
SH3 940..993 CDD:302595 14/53 (26%)
PLCG1XP_005260495.1 PH_PLC_gamma 29..151 CDD:270168 6/25 (24%)
PH <71..142 CDD:278594 5/16 (31%)
PI-PLCc_gamma 319..>466 CDD:176534 30/158 (19%)
PH-like 489..>523 CDD:302622 6/50 (12%)
SH2_N-SH2_PLC_gamma_like 545..649 CDD:199829 19/109 (17%)
SH2_C-SH2_PLC_gamma_like 663..765 CDD:198186 28/113 (25%)
SH3_PLCgamma1 791..850 CDD:212903 15/61 (25%)
PHsplit_PLC_gamma <864..933 CDD:270054
PLCYc 954..1069 CDD:128454
C2_PLC_like 1087..1250 CDD:175974
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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