DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and stac3

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001003505.1 Gene:stac3 / 445111 ZFINID:ZDB-GENE-040801-248 Length:334 Species:Danio rerio


Alignment Length:307 Identity:64/307 - (20%)
Similarity:102/307 - (33%) Gaps:110/307 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   728 TLYLKSEHERDKWRKALTEAMESLEPPG----CQSTD--HKMEIYTFDAPTTCRHCSKFLKGRIH 786
            |:|...:.|        .|..|:..||.    .|..|  ||.:.:....|..|..|::.:.....
Zfish    32 TVYFVYDEE--------VEEEEAPPPPTPEPIVQVNDKPHKFKDHYCKKPKFCDVCARMIVLNNK 88

  Fly   787 QGYRCKVCQISVHKGCIS--STGRCKQNPVSVPP--------PVCDRQLSEFNWFAGNMDRETAA 841
            ...|||.|:.::|..|.|  ...||..   .:||        |:.|::::.    .|..:|....
Zfish    89 FALRCKNCKTNIHHSCQSYVQFQRCFG---KIPPGFRRAYSSPLYDQEINN----PGQQNRTDPV 146

  Fly   842 HRLENRRIGTYLLRVRPQGPSTAHETMYALSLK---------------------------TDDNV 879
              .:..|:|..:.....:..|...:.|..:.::                           |||  
Zfish   147 --FDTLRVGVIMANKERKKGSEDKKNMMMMMMEEEEAQQPKEDEEGAEGKQDGDKKDKTATDD-- 207

  Fly   880 IKHMKINQENSGDSMLYCLSSRRHFKTIVELVSYYERNDLGENFAGLNQSLQWPYKEVIATALYD 944
             |:.| .|:....|..|....|  ||.|       |::||                        |
Zfish   208 -KNKK-QQQTFSQSHYYMALYR--FKAI-------EKDDL------------------------D 237

  Fly   945 YEPKAGSNQLQLRTDCQVLVIGKDGDSKGWWRGKIGDTVGYFPKEYV 991
            :.|  |.         ::.|:  |..::.|||||||:..||.|..|:
Zfish   238 FHP--GD---------RITVL--DDSNEEWWRGKIGEKTGYLPMTYI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723
RhoGEF 428..603 CDD:279015
PH_Vav 624..753 CDD:269930 5/24 (21%)
PH 641..749 CDD:278594 4/20 (20%)
C1_1 761..804 CDD:278556 11/42 (26%)
SH2_Vav_family 824..934 CDD:198193 21/136 (15%)
SH3 940..993 CDD:302595 16/52 (31%)
stac3NP_001003505.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
C1 63..108 CDD:237996 12/44 (27%)
STAC2_u1 120..>197 CDD:293269 8/82 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..215 6/40 (15%)
SH3 221..273 CDD:302595 24/97 (25%)
SH3 280..330 CDD:302595
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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