DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and CG30456

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_611188.3 Gene:CG30456 / 36929 FlyBaseID:FBgn0050456 Length:682 Species:Drosophila melanogaster


Alignment Length:709 Identity:143/709 - (20%)
Similarity:234/709 - (33%) Gaps:233/709 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 QLSPTERSHSDEAIYKDLHSTDLNMRKTSSIDASASSSAEYYDRTSQSGSLDENSDITIENGTED 215
            |.:..|| ||...:..:|.|.|: .|..||:.:|:||....|...|.:.|...:..:...:..|.
  Fly    34 QAAEQER-HSSTLVSSNLESNDV-ARPVSSVSSSSSSIQLSYSVNSDTDSSYRHRSLLKMHEAES 96

  Fly   216 IDDYIEDSL--SNMCDSTIDNDAEDAGVETPLLSDCQGSHVRELSFDLALDVVSSTTDG---ASN 275
            :.....:|.  |.|...|.|          |.|.|.:....|..:|...:..:......   ..|
  Fly    97 VGGLGTESTPESPMSPQTPD----------PALLDVRQKVHRFEAFRTNICFIKQERHSLKLLEN 151

  Fly   276 AVTPTPESYARQSQSPLAAAAPSVPVSAAPGPPMGRLVSTSSSSSSLLVS-----ESQRLQRAAA 335
            ...|:.|..:....:|     |:.|......|.:|   |..||.||.:.|     ...|.:....
  Fly   152 RRHPSFEDQSEDHHTP-----PATPPRRIRLPGLG---SRGSSRSSSIPSFQAGIHEVRSEDEVD 208

  Fly   336 AVYNYRSSMASTEHEY-------AYIYSED--DEKVYEDLCYVTFQA------------------ 373
            .:.::.:...:...||       ..:.||:  |.||.:.....:..|                  
  Fly   209 QISDFETDSHTAAEEYLVVDTTSEVVPSEEVADSKVDQQQVQRSISADQSKEALTLPLKMRNDFP 273

  Fly   374 ---KAKPEVTTDNIACNGTGYDHTNTKEEEVYQDLCALHRTSRSQTASSTSFEQRDY-------V 428
               ::.|...|:.|   ||..:|...|...|||.         .........|.||.       :
  Fly   274 RNYRSTPRRKTEII---GTTNEHLVGKFHSVYQP---------KDEEEEVEIELRDKSDKCVHPI 326

  Fly   429 IRELIDTESNYLDVLTALKTKFMGPLERHLN---QDELRL--------IFPRIRELVDIH-TKFL 481
            :.|||.||..|::.|      |.| :|.:.|   :.:|.|        :|..|.::.:.| .:||
  Fly   327 LEELIKTEEAYVNNL------FTG-IENYGNIFQRKDLPLGLRGKKYDLFGNIEQIAEFHRDEFL 384

  Fly   482 DKL---RESLTPNAKVKMAQVFLDFREPFLIYG------------EFCSLLLGAIDYLADVCKKN 531
            ..|   |..|.     ::...||.|.:....||            :.|.|..   :|...:    
  Fly   385 PMLQRNRRDLK-----RLFDEFLQFLDQHCFYGYVIFTMNKQKSLKLCDLYK---NYFTSI---- 437

  Fly   532 QIIDQLVQKCERDYNVGKLQLRDILSVPMQRILKYHLLLDKLVKETSPLHDDYRSLERAKEAMID 596
                    :.|||   .||.:...|..|:||:.:|.|||                          
  Fly   438 --------RLERD---DKLGINSFLVQPIQRMARYPLLL-------------------------- 465

  Fly   597 VSQYINEVKRDSDHLVIIQKVKDSICDIH-----LLQNGNGSDLLQ------------YGRLLLD 644
             :|:||...::.|  ::::.:.:|.|.:.     ||...|.|:::.            .|:....
  Fly   466 -TQFINTFFKNRD--IVMKPLIESCCRLEKRLRALLTTTNESEIINDIVDCHEFNVYYQGKFRKV 527

  Fly   645 GELHIKAHEDQKTKLRYAFVFDKILIMVKALHIKTGDMQYTYRDSHNLADYRVEQSHSR---RTI 706
            .|..:..|:.:::.....|:|||.:|             ||.....||.      .|.|   ..|
  Fly   528 NEFQVLDHKLKRSYRSKVFIFDKCII-------------YTEIKGKNLL------FHGRYPCEHI 573

  Fly   707 GRDTRFKYQLLLARKSGKTAFTLYLKSEHERDKWRKALTEAMESLEPPGCQSTDHKMEI 765
            |...:.|            :||||    :||.|.::             |:.|...::|
  Fly   574 GISAKTK------------SFTLY----YERRKQQE-------------CEFTADPVQI 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723
RhoGEF 428..603 CDD:279015 44/201 (22%)
PH_Vav 624..753 CDD:269930 28/148 (19%)
PH 641..749 CDD:278594 23/110 (21%)
C1_1 761..804 CDD:278556 1/5 (20%)
SH2_Vav_family 824..934 CDD:198193
SH3 940..993 CDD:302595
CG30456NP_611188.3 RhoGEF 326..470 CDD:279015 43/200 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462283
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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