DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and inaC

DIOPT Version :10

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster


Alignment Length:72 Identity:24/72 - (33%)
Similarity:31/72 - (43%) Gaps:11/72 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   756 CQSTDHKMEIYTFDAPTTCRHCSKFLKGRIHQGYRCKVCQISVHKGCISSTGRCKQNPVSVPPPV 820
            |....|.....|:..||.|..|...|.|..|||.:|:.|.::||..|        |..|   ||:
  Fly   132 CAKVKHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLNVHHAC--------QETV---PPM 185

  Fly   821 CDRQLSE 827
            |...:||
  Fly   186 CGADISE 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH_VAV 19..135 CDD:409050
RhoGEF 428..602 CDD:459876
PH_Vav 624..753 CDD:269930
C1_VAV 759..810 CDD:410360 16/50 (32%)
SH2_Vav_family 824..934 CDD:198193 2/4 (50%)
SH3 940..993 CDD:473055
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342
C1 137..190 CDD:412127 21/63 (33%)
C2_PKC_alpha_gamma 194..324 CDD:175992
STKc_PKC 375..692 CDD:270722
Blue background indicates that the domain is not in the aligned region.

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