DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and CG30440

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_610172.1 Gene:CG30440 / 35496 FlyBaseID:FBgn0050440 Length:1057 Species:Drosophila melanogaster


Alignment Length:988 Identity:203/988 - (20%)
Similarity:367/988 - (37%) Gaps:287/988 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 HLDPSS------LDPREFNRKPQMAQFLCSKNIKL-------FLDVCHNNFGIRDADLFEPTMLY 117
            ||.|.:      .:|.| .|..|.:.....||.::       .|..|::..   ..:.::...||
  Fly   182 HLQPETQILKPVTEPNE-TRFDQHSPDWLFKNSRIGDVSNSSKLSACNSEL---PPEEYKGRTLY 242

  Fly   118 DLTNF-------HRVLITL-SKLS-------------------QCRKVQQLHPDLIGFNLQLSPT 155
            ..|.|       .|.|||. ||:|                   .|...|.||.:....| ::.|:
  Fly   243 HDTKFDCAYIKNRRPLITTESKMSITEAEHPQTKYTDIKYDYKTCSISQGLHQNKAFLN-KVPPS 306

  Fly   156 ERS---HS-DEAIYKDLHSTDL------------------NMRKTSSIDASASSSAEYYDRTSQS 198
            ::|   || |...|:::....|                  |..|.:.|.|:.:   |.....:||
  Fly   307 KQSKPFHSVDYDYYENIQKLHLSKESERQIRDNGDPNDLQNFLKKNLIKATTN---ELLKAAAQS 368

  Fly   199 GSLDENSDITIENGTEDIDDYIEDSLSNMCDSTIDNDAEDAGVETPLLSDCQGSHVRELSFDLAL 263
               .:..:|.:|....|::...||..||...::..||  ...|....::.|:  .:|  |::...
  Fly   369 ---TKKCNIDLERKLNDLNIKEEDHTSNDSGNSYKND--PYLVSMSKINSCK--FIR--SYNRDC 424

  Fly   264 DVVSSTTDGASNAVTPTPESYARQSQSPLAAAAPSVPVSAAPGPPMGRLVSTSSSSSSLLVSESQ 328
            :.:..|.|.:.  :....:|:..||...|::|:                ||.||...|.|..:|.
  Fly   425 ETIFPTGDHSD--LNEFRKSFMPQSVDLLSSAS----------------VSLSSCDGSCLNKDSI 471

  Fly   329 RLQRAAAAVYNYRSSMASTEHEYAYIYSED-----DEKVYEDLCYVTFQAKAKPEVTTDNIACNG 388
            ..........|....:|:..:|    .|:|     :|.|:.:..|..|.     |..|.:..|:|
  Fly   472 CGSEEDCCECNEYQCIATPPNE----LSKDCLNAVEEGVFCNTEYDDFH-----ENLTSSCCCSG 527

  Fly   389 TGYD-----------------------HTNTKEEEVYQDLCALHRTSRSQTAS------STSF-- 422
            :..|                       |.:..:|::.:....|.||..:...:      :|.|  
  Fly   528 SFCDDDGCSYLDEGLSVDIKSKNVQSLHESGTDEKLSRKTILLARTEDTNDVTQGISDGTTYFTG 592

  Fly   423 ------------------------EQRDYVIRELIDTESNYLDVLTALKTKFMGPLERHLN---- 459
                                    .:|.::::||.:||..|::.:.::...:...|:...:    
  Fly   593 SLNITHLPKSNEIFKKPQDPEMQRHRRGHILKELFETEKIYVNEIASILKGYYDRLKSDESAPAS 657

  Fly   460 -QDELRLIFPRIRELVDIHTK-FLDKLRESLTPNAKVKMAQVFLDFREPFL-IYGEFCSLLLGAI 521
             |.:..::|..:.|:...|.. ||..|...::...:|  |..|:..|:.|. :|..:|.      
  Fly   658 LQGKANVLFGNLNEIYSFHNDVFLKDLENCISVTERV--ALCFVKRRDKFYQLYSFYCQ------ 714

  Fly   522 DYLADVCKKNQIIDQLV------QKCERDYNVG---KLQLRDILSVPMQRILKYHLLLDKLVKET 577
                ::.:..::.:.||      ::|:    :|   ||.|...|..|:|||.||.|||..|:..|
  Fly   715 ----NIQRSEKLRETLVDTHMFFKECQ----IGLGHKLPLGAYLLKPVQRITKYQLLLKDLLLFT 771

  Fly   578 SPLHDDYRSLERAKEAMIDVSQYINEVKRDSDHLVIIQK-VKDSICDIHLLQNGNGSDLLQYGRL 641
            .  :|..|                ||:|...|.::|:.| |.||:..|.:  .|...||.:.|.|
  Fly   772 D--NDSCR----------------NELKNALDCMLIVLKCVNDSMHQISI--TGFSGDLAKQGEL 816

  Fly   642 LLDG--ELHIKAHED----QKTKLRYAFVFDKILIMVKALHIKTGDMQYTYRDSHNLADYRVEQS 700
            |:..  ::.|::.:|    .|.|.|:.|::.|.|::.|... |:|..:.:|:..   :|.::.|.
  Fly   817 LMQDSFQVWIESKKDIRLRMKPKRRHIFLYQKSLLLCKQTS-KSGYNKSSYQFK---SDVKMSQI 877

  Fly   701 HSRRTIGRDTRFKYQLLLARKSGKTAFTLYLKSEHERDKW----RKALTEAMESLEPPGCQSTDH 761
            ....::..|.: ::::.|  |..:..:||...:...::.|    ::.|...:|.|:  |.|...:
  Fly   878 GLTESVSGDAK-RFEVWL--KGRQEVYTLQASTIGVKEMWVAEIKRVLFNQLEKLK--GDQIARY 937

  Fly   762 KMEIYTFDAPTTCR-----HCSKFLKGRIHQGYRCKVC------------QISVHKGCISSTGRC 809
            .:...:....::|.     |||          .|...|            .|...|.|:|.    
  Fly   938 NIRHQSLWQKSSCEAPNITHCS----------LRRTECFELPLNDSNRNTNIRSEKTCLSD---- 988

  Fly   810 KQNPVSVPPPVCDRQLSEFNWFAGNMDRETAAHRLENRRIGTYLLRVRPQ-----GPSTAHE--- 866
             ||.|: .|.|.| |..:.:|.:...|.:      |:..|...|::...|     ..|::|:   
  Fly   989 -QNIVN-GPSVQD-QHEKNSWSSDCSDID------EDETINPILMQKTGQPKLLWNRSSSHQVFI 1044

  Fly   867 -TMYALSLKTDDN 878
             :.|.||.||.:|
  Fly  1045 KSKYILSRKTVNN 1057

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723 20/86 (23%)
RhoGEF 428..603 CDD:279015 41/190 (22%)
PH_Vav 624..753 CDD:269930 30/138 (22%)
PH 641..749 CDD:278594 23/117 (20%)
C1_1 761..804 CDD:278556 9/59 (15%)
SH2_Vav_family 824..934 CDD:198193 15/64 (23%)
SH3 940..993 CDD:302595
CG30440NP_610172.1 RhoGEF 622..796 CDD:214619 48/207 (23%)
PH-like 802..925 CDD:302622 27/131 (21%)
PH 829..922 CDD:278594 19/99 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462273
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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