DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and CG43658

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001259643.1 Gene:CG43658 / 32729 FlyBaseID:FBgn0263706 Length:2263 Species:Drosophila melanogaster


Alignment Length:633 Identity:123/633 - (19%)
Similarity:221/633 - (34%) Gaps:149/633 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 SSIDASASSSAEYYDRT---SQSGSLDENSDITIENGTEDIDDYIEDSLSNMCDSTIDNDAEDAG 240
            ||.:....|.....||.   .:....|:|.|:    |.|::....|.:.|::...:..|..... 
  Fly   701 SSSERDTKSPCRERDRNLERDRDRERDKNDDL----GEEEVLTEEEQTSSSVSSLSAGNQRNSQ- 760

  Fly   241 VETPLLSDCQGSHVRELSFDLALDVVSSTTDGASNAVTPTPESYARQSQSPLA------AAAPSV 299
                 |........:.||||......:.:..|:::.    |.|.|..|.:..:      |:|.::
  Fly   761 -----LRSTFNKAKQHLSFDKWRTAATGSATGSASG----PGSSATDSNNAASNMIMRRASACTM 816

  Fly   300 PVSAAPGPPMGRLVSTSSSSSSLLVSESQ--RLQRAAAAVYNYRSSMASTEHEYAYIYSEDDEKV 362
            |.|...|   |..|.:|....:....||.  ||.|       :.|....:.|:|. :...|..  
  Fly   817 PSSGGGG---GAGVGSSQREEATTPGESPGGRLSR-------WFSIRRGSSHQYD-VGGRDGR-- 868

  Fly   363 YEDLCYVTFQAKAKPEVTTDNIACN------GTG--------YDHTNTKE-------------EE 400
                 :.|..:...|:..:.|...|      |||        .|..:.::             .|
  Fly   869 -----HSTASSFDTPDSGSGNSPKNGSNAVAGTGGAGSQGVALDAASPQKLANLGASKMMPGVPE 928

  Fly   401 VYQDLCALHR---------TSRSQTASSTSFE-------------------QRDYVIRELIDTES 437
            ...|....:|         .||:...:.|:..                   :|.:::..::.:|:
  Fly   929 SEDDEATANRFDVDLMMTPGSRANGTARTAHNRLIVPMLPPAPAGLSQQQLKRRHIVAAIVHSEN 993

  Fly   438 NYLDVLTALKTKFMGPLER----HLNQDELRLIFPRIRELVDIHTKFLDKLRESLTP-NAKVKMA 497
            :|:..|..|...:..|||.    .||..::..:|..:.:::..|..|...|.|.:.. :...|:.
  Fly   994 SYVATLQRLVNDYKKPLEECSPPVLNPVKIATLFHCLPDILHSHKLFRISLAECVRNWDRDEKIG 1058

  Fly   498 QVFLD-FREPFL--IYGEFCSLLLGAIDY----------LADVCKKNQIIDQLVQKCERDYNVGK 549
            ..|:. |.:|.|  ||..|.:....|::.          |||..|..||...           .:
  Fly  1059 DCFVSAFGKPQLLEIYSGFINNFSAAMELAKMEEKRKSALADFFKVKQISAH-----------DR 1112

  Fly   550 LQLRDILSVPMQRILKYHLLLDKLVKETSPLHDDYRSLERAKEAMIDVSQYINEVKRDSDHLVII 614
            |....::..|:||..::.|.|..|:|.|...|.|..||:.|...:..:::.:||.||:::.   .
  Fly  1113 LSFFGLMVKPVQRFPQFILFLQDLLKYTPQGHHDRMSLQLALSQLELLAELLNESKREAEQ---Y 1174

  Fly   615 QKVKDSICDIHLLQNGNGSDLLQYG----------RLLL--DGELHIKAHED---QKTKLRYAFV 664
            |..|:.:..|....|.....|....          |.||  |...|::.::.   .|.|.|...:
  Fly  1175 QAFKEMLGHISGTFNARSLSLSSVSVSDSAGGHRPRYLLREDNVTHMEFNQAGFIVKCKQRRLLL 1239

  Fly   665 F-DKIL---IMVKALHIKTGDMQYTYRDSHNLADYRVEQSHSRRTIGR 708
            . ||::   :..|..|......:.|::....:.|..:..:.:..|:.|
  Fly  1240 LNDKVICVSVAPKQSHDFGATEKLTFKWMFPVNDVEIVDNSTSATLSR 1287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723
RhoGEF 428..603 CDD:279015 43/192 (22%)
PH_Vav 624..753 CDD:269930 19/104 (18%)
PH 641..749 CDD:278594 15/77 (19%)
C1_1 761..804 CDD:278556
SH2_Vav_family 824..934 CDD:198193
SH3 940..993 CDD:302595
CG43658NP_001259643.1 RhoGEF 984..1153 CDD:279015 42/179 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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