DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and Plekhg4

DIOPT Version :10

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_038954139.1 Gene:Plekhg4 / 307796 RGDID:1310790 Length:1231 Species:Rattus norvegicus


Alignment Length:352 Identity:74/352 - (21%)
Similarity:141/352 - (40%) Gaps:68/352 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   410 RTSRSQTASSTSFEQRDY--------VIRELIDTESNYLDVLTALKTKFMGPLERHLNQDELR-- 464
            |:|.|...|.:|    |:        |:.|::.||..|:..|......:...|:|......||  
  Rat   730 RSSPSVPLSGSS----DFRSPNRLQLVLAEMVATEREYVRALDYTIQNYFPELDRSDVPQGLRGQ 790

  Fly   465 --LIFPRIRELVDIHTKFLDKLRESLTPNAKVKMAQVFLDFREPFLIYGEFCSLLLGAIDYLADV 527
              .:|..:.:|.|.|..|..:..|:.|.:.. ::|..||..|..|.:|..:              
  Rat   791 RAHLFGNLEKLRDFHFHFFLRELEACTRHPP-RVAHAFLRHRVQFGMYALY-------------- 840

  Fly   528 CKKNQIIDQLVQKC------ERDYNVG-KLQLRDILSVPMQRILKYHLLLDKLVKETSPLHDDYR 585
            .|.....|.|:...      |:...:| .|.|...|..|:||:.||.|||.:|.:.......:..
  Rat   841 SKNKPRSDALMSNYGHTFFKEKQQALGDHLDLASYLLKPIQRMSKYALLLQELARACGGPAQELG 905

  Fly   586 SLERAKEAMIDVSQYINEVKRDSDHLVIIQKVKDSI--CDIHLLQNGNGSDLLQYGRLLLDGELH 648
            :|: |.::::..     :::..:|.|.:     |:|  ||::|.:.         |:|:...|..
  Rat   906 ALQ-AAQSLVHF-----QLRHGNDLLAM-----DAIQGCDVNLKEQ---------GQLVRQDEFT 950

  Fly   649 IKAHEDQKTKLRYAFVFDKILIMVKALHIKTGDMQYTYRDSHNLADYRVEQSHSRRTIGRDTRFK 713
            ::|...:  ..|..|:|:::|:..|......|...:||:.|..:||..:.:...      :::.:
  Rat   951 VRAGHHK--SCRRVFLFEELLLFSKPRRGPAGVDIFTYKRSFKMADLGLTECCG------ESKLR 1007

  Fly   714 YQLLLARKSGKTAFTLYLKSEHERDKW 740
            :::...|:..:..|.|.......:..|
  Rat  1008 FEIWFRRRKARDLFVLQASDVATKQAW 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH_VAV 19..135 CDD:409050
RhoGEF 428..602 CDD:459876 42/184 (23%)
PH_Vav 624..753 CDD:269930 20/117 (17%)
C1_VAV 759..810 CDD:410360
SH2_Vav_family 824..934 CDD:198193
SH3 940..993 CDD:473055
Plekhg4XP_038954139.1 DUF3584 <376..>596 CDD:432349
RhoGEF 749..915 CDD:238091 42/181 (23%)
PH_puratrophin-1 915..1050 CDD:270062 26/147 (18%)
Blue background indicates that the domain is not in the aligned region.

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