DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and Stac3

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001346680.1 Gene:Stac3 / 237611 MGIID:3606571 Length:360 Species:Mus musculus


Alignment Length:290 Identity:62/290 - (21%)
Similarity:105/290 - (36%) Gaps:70/290 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   723 GKTAFTLYLKSEHERDKWRKALTEAMESLEPPG-CQSTDHKMEIYTFDAPTTCRHCSKFLKGRIH 786
            |...:.:|.:.|.|.:       |.....|||. .....||.:.:.|..|..|..|::.:.....
Mouse    57 GGPIYYIYEEEEEEEE-------EEEPPPEPPKLVND
KPHKFKDHFFKKPKFCDVCARMIVLNNK 114

  Fly   787 QGYRCKVCQISVHKGCIS--STGRCKQNPVSVPPPVCDRQLSEFNWFAGNMDRETAAHR----LE 845
            .|.|||.|:.::|:.|.|  ...||..   .:||..  |:......::......:||:|    .|
Mouse   115 FGLRCKNCKTNIHEHCQSYV
EMQRCFG---KIPPGF--RRAYSSPLYSDQQYAVSAANRNDPVFE 174

  Fly   846 NRRIGTYLL-RVRPQGPSTAHETMYAL-----------SLKTDD--NVIKHMKINQENSGDSMLY 896
            ..|:|..:. :.|.:|.:.....:.|:           ..|:.|  |..|..|..::...|....
Mouse   175 TLRVGVIMANKERKKGQADKKNPLAAMMEEEPESARPEEGKSQDGNNAEKDKKAEKKTPDDKNKQ 239

  Fly   897 CLSSRRHFKTIVELVSYYERNDLGENFAGLNQSLQWPYKEVIATALYDYEPKAGSNQLQLRTDCQ 961
            ....:.|:...:......|::||                        |:.|..           :
Mouse   240 PG
FQQSHYFVALYRFKALEKDDL------------------------DFPPGE-----------K 269

  Fly   962 VLVIGKDGDSKGWWRGKIGDTVGYFPKEYV 991
            :.||  |..::.|||||||:.||:||..::
Mouse   270 ITVI--DDSNEEWWRGKIGEKVGFFPPNFI 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723
RhoGEF 428..603 CDD:279015
PH_Vav 624..753 CDD:269930 5/29 (17%)
PH 641..749 CDD:278594 5/25 (20%)
C1_1 761..804 CDD:278556 13/42 (31%)
SH2_Vav_family 824..934 CDD:198193 19/127 (15%)
SH3 940..993 CDD:302595 16/52 (31%)
Stac3NP_001346680.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..86 8/35 (23%)
C1_1 89..134 CDD:365894 14/44 (32%)
STAC2_u1 146..>187 CDD:374707 7/42 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..241 9/53 (17%)
SH3_Stac3_1 247..299 CDD:212919 19/88 (22%)
SH3_Stac_2 306..356 CDD:212768
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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