DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and Plekhg1

DIOPT Version :10

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_006512502.1 Gene:Plekhg1 / 213783 MGIID:2676551 Length:1487 Species:Mus musculus


Alignment Length:564 Identity:139/564 - (24%)
Similarity:245/564 - (43%) Gaps:113/564 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 LALDVVSSTTDGASNAVTPTPESYARQSQSP----LAAAAPSVPVSAAPGPPMGRLVSTSSSSSS 321
            |.|||.|:.      ::.|.|.:.|..|:||    :..:....|:|..         |||||:||
Mouse    69 LQLDVPSAV------SLVPDPRTTAEPSESPEPKTMELSDSDRPISFG---------STSSSASS 118

  Fly   322 LLVSESQRLQRAAAAVYNYRSSMASTEHEYAYIYSEDDEKVYEDLCYVTFQAKAKPEVTTDNIAC 386
                      |.:...:..|.::.|..|  ..::.:|.|.....|..|..:..:..|:..|..| 
Mouse   119 ----------RDSHGSFGSRMTLVSNSH--LGLFHQDKEAGAIKLELVPARPFSSSELQRDKPA- 170

  Fly   387 NGTGYDHTNTKEEEVYQDLCALHRTSRSQTASSTSFEQR----DYVIRELIDTESNYLDVLTALK 447
               |..:.|...|:..:....:..:...||.:.::...:    |.|::|:::||..|:.   .||
Mouse   171 ---GPQNMNGVSEKQPRTPWRMDTSGTPQTTADSATSPKLLYVDRVVQEILETERTYVQ---DLK 229

  Fly   448 TKFMGPLERHLNQDELRLI-------FPRIRELVDIHTKFLDKLRESLTPNAKVKMAQVFLDFRE 505
            :...|.||...:|.:|.|:       |..|:::...:::.|..|..  ..|..|.:|:.|:...|
Mouse   230 SIVEGYLECIRDQTKLPLVTEDRAALFGNIQDIYHFNSELLQDLEN--CENDPVAIAECFVSKSE 292

  Fly   506 PFLIYGEFCSLLLGAIDYLADVCKKNQIIDQLVQKCERDYNV-GKLQLRDILSVPMQRILKYHLL 569
            .|.||.::|:....::..|.: |.:|:|:.:..:  ||...: ..|.|...|..|:|||||||||
Mouse   293 EFHIYTQYCTNYPRSVAVLTE-CMRNKILTKFFR--ERQETLRHSLPLGSYLLKPVQRILKYHLL 354

  Fly   570 LDKLVKETSPLHDDYRSLERAKEAMIDVSQYINEVKRDSDHLVIIQKVKDSICDIHLLQNGNGSD 634
            |.::........:.|..:..|.:.|..|:.:||::||..:|.|.:|:::.      ||.|..|.|
Mouse   355 LHEIENHLDKATEGYDVVLDAIDTMQRVAWHINDMKRKHEHAVRLQEIQS------LLTNWEGPD 413

  Fly   635 LLQYGRLLLDGELHIKAHEDQKTKLRYAFVFDKILIMVKALHIKTGDMQYTYRDSHNLAD--YRV 697
            |..||.|:|:|...|:..:.::|    .|:.|::|::.     |..|..:||: :|.|..  ..|
Mouse   414 LTSYGELVLEGTFRIQKAKKERT----LFLLDQLLLIT-----KKRDDTFTYK-AHILCGNLMLV 468

  Fly   698 EQSHSRRTIGRD----TRFKYQLLLARKSGKTAFTLYLKSEHERDKW------------------ 740
            |      .|.::    :.|.|      |:.|...|:..||:.::..|                  
Mouse   469 E------VIPKEPLSFSVFHY------KNPKLQHTVQAKSQQDKRLWVLHLKRLILENHAAAAKI 521

  Fly   741 ----RKALTEAMESLEPPG-CQSTDHKMEIYTFDAPTTCRHCSK 779
                ::|:.| |:::..|| |.|.:.:|:.....||...|..|:
Mouse   522 PAKAKQAILE-MDAIHYPGFCYSPEGEMKTPCGSAPHRLRRKSE 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH_VAV 19..135 CDD:409050
RhoGEF 428..602 CDD:459876 50/181 (28%)
PH_Vav 624..753 CDD:269930 36/156 (23%)
C1_VAV 759..810 CDD:410360 5/21 (24%)
SH2_Vav_family 824..934 CDD:198193
SH3 940..993 CDD:473055
Plekhg1XP_006512502.1 RhoGEF 213..387 CDD:459876 50/181 (28%)
PH_PLEKHG1_G2_G3 369..514 CDD:270063 44/172 (26%)
Blue background indicates that the domain is not in the aligned region.

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