DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and F48G7.9

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_503271.1 Gene:F48G7.9 / 185997 WormBaseID:WBGene00018620 Length:125 Species:Caenorhabditis elegans


Alignment Length:70 Identity:25/70 - (35%)
Similarity:29/70 - (41%) Gaps:0/70 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   761 HKMEIYTFDAPTTCRHCSKFLKGRIHQGYRCKVCQISVHKGCISSTGRCKQNPVSVPPPVCDRQL 825
            ||........||.|..|||.:.|...|||||..|:..|||.|.:|...|.....|....:.....
 Worm    27 HKFRAAALLQPTCCAFCSKIIYGLGKQGYRCLGCETVVHKKCHASMITCCVYDSSRRSSLASVST 91

  Fly   826 SEFNW 830
            |..||
 Worm    92 STKNW 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723
RhoGEF 428..603 CDD:279015
PH_Vav 624..753 CDD:269930
PH 641..749 CDD:278594
C1_1 761..804 CDD:278556 19/42 (45%)
SH2_Vav_family 824..934 CDD:198193 3/7 (43%)
SH3 940..993 CDD:302595
F48G7.9NP_503271.1 C1_1 27..76 CDD:365894 20/48 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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