DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vav and VAV3

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_006104.4 Gene:VAV3 / 10451 HGNCID:12659 Length:847 Species:Homo sapiens


Alignment Length:1087 Identity:277/1087 - (25%)
Similarity:434/1087 - (39%) Gaps:355/1087 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WRECVAWLTRCKVIPPDHKAAQPDAEIRILAMTLRDGVLLCNLVIHLDPSSLDPREFNRKPQMAQ 85
            |::|..||..|||:|.:|:.....|::..||.|||||||||.|:.:|...|::.:|.|.:|||:|
Human     4 WKQCAQWLIHCKVLPTNHRVTWDSAQVFDLAQTLRDGVLLCQLLNNLRAHSINLKEINLRPQMSQ 68

  Fly    86 FLCSKNIKLFLDVCHNNFGIRDADLFEPTMLYDLTNFHRVLITLSKLSQCRKVQQLHPDLIGFNL 150
            |||.|||:.||..|...||:|.::|||...|:|:.:|.:|:.|||:||:.       |..:...:
Human    69 FLCLKNIRTFLTACCETFGMRKSELFEAFDLFDVRDFGKVIETLSRLSRT-------PIALATGI 126

  Fly   151 QLSPTERSHSDEAIYKDLHSTDLNMRKTSSIDASASSSAEYYDRTSQSGSLDENSDITIENGTED 215
            :..|||.|.:||.|||                                                 
Human   127 RPFPTEESINDEDIYK------------------------------------------------- 142

  Fly   216 IDDYIEDSLSNMCDSTIDNDAEDAGVETPLLSDCQGSHVRELSFDLALDVVSSTTDGASNAVTPT 280
                   .|.::.|.|:..|.||       |.||                               
Human   143 -------GLPDLIDETLVEDEED-------LYDC------------------------------- 162

  Fly   281 PESYARQSQSPLAAAAPSVPVSAAPGPPMGRLVSTSSSSSSLLVSESQRLQRAAAAVYNYRSSMA 345
                                                                             
Human   163 ----------------------------------------------------------------- 162

  Fly   346 STEHEYAYIYSEDD-EKVYEDLCYVTFQAKAKPEVTTDNIACNGTGYDHTNTKEEEVYQDLCALH 409
                    :|.||: .:|||||                             .|.||.:|..|..:
Human   163 --------VYGEDEGGEVYEDL-----------------------------MKAEEAHQPKCPEN 190

  Fly   410 RTSRSQTASSTSFEQRDYVIRELIDTESNYLDVLTALKTKFMGPLERHLNQDELRLIFPRIRELV 474
                         :.|...:.|:..||..|.:.|.:::..||.||:|.|...|...:|..|.|||
Human   191 -------------DIRSCCLAEIKQTEEKYTETLESIEKYFMAPLKRFLTAAEFDSVFINIPELV 242

  Fly   475 DIHTKFLDKLRESLTPNAKVKMAQVFLDFREPFLIYGEFCSLLLGAIDYLADVCKKNQIIDQLVQ 539
            .:|...:.::.:|:.......:.|||::::|..:|||::||.:..||..|..:.|..:.:...::
Human   243 KLHRNLMQEIHDSIVNKNDQNLYQVFINYKERLVIYGQYCSGVESAISSLDYISKTKEDVKLKLE 307

  Fly   540 KCERDYNVGKLQLRDILSVPMQRILKYHLLLDKLVKETSPLHDDYRSLERAKEAMIDVSQYINEV 604
            :|.:..|.||..|||:|.|||||:|||||||.:|||.|:. ..:..:|:.|.:||.|::||:|||
Human   308 ECSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTTD-PTEKANLKLALDAMKDLAQYVNEV 371

  Fly   605 KRDSDHLVIIQKVKDSICDIHLLQNGNGSDLLQYGRLLLDGELHIKAHEDQKTKLRYAFVFDKIL 669
            |||::.|..|::.:.||      :|.| ..:|.:||...|||:.|...:....:.|:.|:||..:
Human   372 KRDNETLREIKQFQLSI------ENLN-QPVLLFGRPQGDGEIRITTLDKHTKQERHIFLFDLAV 429

  Fly   670 IMVKALHIKTGDMQYTYRDSHNLADYRVEQSHSRRTIGRDTRFKYQLLLARKSGKTAFTLYLKSE 734
            |:.|    :.|| .|..::..:|..|::  :::..|...:.::.|...|....|:.....|.|::
Human   430 IVCK----RKGD-NYEMKEIIDLQQYKI--ANNPTTDKENKKWSYGFYLIHTQGQNGLEFYCKTK 487

  Fly   735 HERDKWRKALTEAMESLEPPGCQSTDHKMEIYTFDAPTTCRHCSKFLKGRIHQGYRCKVCQISVH 799
            ..:.||.:....|:.::.|....|..|..:::||...|:|:.|...|:|..:|||.|..|....|
Human   488 DLKKKWLEQFEMALSNIRPDYADSNFHDFKMHTFTRVTSCKVCQMLLRGTFYQGYLCFKCGARAH 552

  Fly   800 KGCISSTGRC---------------------KQNPVSV----------------PPPV------- 820
            |.|:.....|                     ::.|..|                |||.       
Human   553 KECLGRVDNCGRVNSGEQGTLKLPEKRTNGLRRTPKQVDPGLPKMQVIRNYSGTPPPALHEGPPL 617

  Fly   821 ------------------------------------------CDRQLSEFN---WFAGNMDRETA 840
                                                      |..:..:::   |:||.|:|..|
Human   618 QLQAGDTVELLKGDAHSLFWQGRNLASGEVGFFPSDAVKPCPCVPKPVDYSCQPWYAGAMERLQA 682

  Fly   841 AHRLENRRIGTYLLRVRPQGPSTAHETMYALSLKTDDNVIKHMKINQENSGDSMLYCLSSRRHFK 905
            ...|.||...|||:|.|     |.....||:|:|. :|..||:||...:.    .:.::..|.||
Human   683 ETELINRVNSTYLVRHR-----TKESGEYAISIKY-NNEAKHIKILTRDG----FFHIAENRKFK 737

  Fly   906 TIVELVSYYERNDLGENFAGLNQSLQWPYKEV----------------------IATALYDYEPK 948
            :::|||.||:.:.|.|.|..|:.:||:||||.                      ||.|.||:..:
Human   738 SLMELVEYYKHHSLKEGFRTLDTTLQFPYKEPEHSAGQRGNRAGNSLLSPKVLGIAIARYDFCAR 802

  Fly   949 AGSNQLQLRTDCQVLVIGKDGDSKGWWRGKIGDTVGYFPKEYVQEQK 995
            .......|:.|  |:.|.....:.|||||::...||:||..||:|.:
Human   803 DMRELSLLKGD--VVKIYTKMSANGWWRGEVNGRVGWFPSTYVEEDE 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723 52/110 (47%)
RhoGEF 428..603 CDD:279015 63/174 (36%)
PH_Vav 624..753 CDD:269930 29/128 (23%)
PH 641..749 CDD:278594 24/107 (22%)
C1_1 761..804 CDD:278556 16/42 (38%)
SH2_Vav_family 824..934 CDD:198193 38/112 (34%)
SH3 940..993 CDD:302595 18/52 (35%)
VAV3NP_006104.4 CAMSAP_CH 18..103 CDD:288798 40/84 (48%)
RhoGEF 193..369 CDD:238091 64/176 (36%)
PH_Vav 383..506 CDD:269930 31/136 (23%)
PH 407..502 CDD:278594 21/101 (21%)
C1 514..561 CDD:237996 16/46 (35%)
Sufficient for interaction with ROS1. /evidence=ECO:0000269|PubMed:11094073 560..847 70/298 (23%)
SH3_VAV3_1 596..657 CDD:212914 3/60 (5%)
SH2_Vav3 666..768 CDD:198270 40/111 (36%)
SH3_VAV3_2 791..846 CDD:212911 20/56 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 131 1.000 Domainoid score I5144
eggNOG 1 0.900 - - E1_KOG2996
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 431 1.000 Inparanoid score I1723
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52258
OrthoDB 1 1.010 - - D313065at33208
OrthoFinder 1 1.000 - - FOG0001414
OrthoInspector 1 1.000 - - otm41007
orthoMCL 1 0.900 - - OOG6_103071
Panther 1 1.100 - - O PTHR45818
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 1 1.000 - - X1295
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.870

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