DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and plekhg1

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_021325545.1 Gene:plekhg1 / 101886810 -ID:- Length:1513 Species:Danio rerio


Alignment Length:724 Identity:157/724 - (21%)
Similarity:271/724 - (37%) Gaps:204/724 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 PSVPVSAAPGPPMGRLVSTSSSSSSLLVSESQRLQRAAAA----VYNYRSSMASTEHEYAYIYSE 357
            |.|||..|    :...||....||:|....|:.:.....:    .|...||.||:...:..:...
Zfish    17 PEVPVGGA----VLNQVSGPIRSSALRYCSSRSMDSTHCSDRPVSYGSTSSSASSRDSHCSLGGR 77

  Fly   358 DDEKVYEDLCYVTFQAKAKPEVTTDNIACNGTGYDHTNTKEEEVYQDLCALHRTSRSQTASSTSF 422
            .             ...:.||...|:.|...........:|||   :.....|...:|.|...|.
Zfish    78 P-------------VLGSTPERDRDSGAIRLELVPARQLEEEE---ESGRKTRKLTNQDAEIQSP 126

  Fly   423 EQR-----DYVIRELIDTESNYLDVLTALKTKFMGPLERH----LNQDELRLIFPRIRELVDIHT 478
            |.|     |.|:.|:::||..|:..|.::...::..:...    |..:|...:|..||::...::
Zfish   127 EGRKVQYVDRVVEEILETEKTYVQDLRSIVQDYLDCISNQSLLLLGDEERNSLFGNIRDIYRFNS 191

  Fly   479 KFLDKLRESLTPNAK-VKMAQVFLDFREPFLIYGEFCSLLLGAIDYLADVCKKNQIIDQLVQKCE 542
            :.|..|.:.   ||. |.:|:.|:...|.|.||.::|:....::..|.: |.:|:::.:.::  |
Zfish   192 ELLRDLEKC---NANPVAIAKCFVAKSEDFHIYTQYCTNYPRSVAVLTE-CMRNKMVAKFLR--E 250

  Fly   543 RDYNV-GKLQLRDILSVPMQRILKYHLLLDKLVKETSPLHDDYRSLERAKEAMIDVSQYINEVKR 606
            |..:: ..|.|...|..|:||||||||||.::........:.|..::.|.:.|..|:.:||::||
Zfish   251 RQESLKHSLPLGSYLLKPVQRILKYHLLLHEIATHLEKDSEMYDVIQEAIDTMQRVAWHINDMKR 315

  Fly   607 DSDHLVIIQKVKDSICDIHLLQNGNGSDLLQYGRLLLDGELHIKAHEDQKTKLRYAFVFDKILIM 671
            ..:|.|.:|:::.      ||.|..|.||:.||.|:|:|...|:..::::|    .|:|||:|::
Zfish   316 KHEHAVRLQEIQS------LLTNWKGPDLIGYGELVLEGTFRIQRAKNERT----LFLFDKLLLI 370

  Fly   672 VK-------------------------------ALHIKTGDMQYTYRD----------------- 688
            .|                               ..|.|...:|:|.:.                 
Zfish   371 TKKREETYSYKAHILCCNLMLVEVIPKEPLSFSVFHYKNPKLQHTVQAKSQQDKKMWVLHLKRLI 435

  Fly   689 ---------------------------SHNLADYRV--EQSHSRRTIGRDTRFKYQLLLARK--- 721
                                       :||..|.||  ::..|.|.:.|.|....:||...|   
Zfish   436 LENHPAKIPAKAKQAILEMDTANHPSFNHNSDDKRVNTKEGPSPRRVRRKTEPLSKLLKNSKHII 500

  Fly   722 -----SGKTAFTLYLKSE----HERDKWRKALTEAMESLEPPGCQSTDHKMEIYTFDAPTT---- 773
                 ..:::|.:.|.|.    ....:.|..::|:.|||:|......|        |.|.|    
Zfish   501 SSPDIQKRSSFGVTLLSPVASLGSIGRSRSLVSESQESLDPGDHSDVD--------DEPNTQDAD 557

  Fly   774 ------------CRHCSKFLKGRIHQGYRCKVCQISVHKGCISSTGRCKQNPVSVPPPVCDRQLS 826
                        .|...|..:.|::|       |:||     .|..:.:.|.::           
Zfish   558 DEDDTGLSSGGKLRVPGKGSRKRLNQ-------QVSV-----DSIEQWRNNDLT----------- 599

  Fly   827 EFNWFAGNMDRETAAHRLENRRIGTYLLRVRPQGPSTAHETMYAL----------SLKTDDNVIK 881
                   :.|.:||...|:|:.|...:|||.....|...|.:.|:          ::.||..|.:
Zfish   600 -------HADLQTAKQSLQNKVITPPILRVTAPPESDGDEHLRAMLGTGQAPAFCNIWTDHRVRR 657

  Fly   882 HMKINQENS 890
            .|...::.|
Zfish   658 AMFPTRQKS 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723
RhoGEF 428..603 CDD:279015 47/180 (26%)
PH_Vav 624..753 CDD:269930 43/217 (20%)
PH 641..749 CDD:278594 32/196 (16%)
C1_1 761..804 CDD:278556 10/58 (17%)
SH2_Vav_family 824..934 CDD:198193 17/77 (22%)
SH3 940..993 CDD:302595
plekhg1XP_021325545.1 RhoGEF 137..312 CDD:214619 47/180 (26%)
PH_PLEKHG1_G2_G3 293..438 CDD:270063 34/154 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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