DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vav and vav1

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_002940062.1 Gene:vav1 / 100497964 XenbaseID:XB-GENE-6074281 Length:844 Species:Xenopus tropicalis


Alignment Length:1078 Identity:284/1078 - (26%)
Similarity:439/1078 - (40%) Gaps:344/1078 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DLWRECVAWLTRCKVIPPDHKAAQPDAEIRILAMTLRDGVLLCNLVIHLDPSSLDPREFNRKPQM 83
            :|||.|..||.:|:|:||:|:.....|::..||..||||||||.|:.:|.|::::..|.|.:|||
 Frog     2 ELWRHCARWLIQCRVLPPNHRVTLDTAQVCDLAQALRDGVLLCQLLNNLMPNAVNLSEINLRPQM 66

  Fly    84 AQFLCSKNIKLFLDVCHNNFGIRDADLFEPTMLYDLTNFHRVLITLSKLSQCRKVQQLHPDLIGF 148
            :||||.|||:.||..|...|.:|.|||||...|:|:.:|.:|:.|||.||.....|..     |:
 Frog    67 SQFLCLKNIRTFLSTCSEKFKMRRADLFEAFDLFDVRDFGKVIDTLSILSWTSVAQNR-----GY 126

  Fly   149 NLQLSPTERSHSDEAIYKDLHSTDLNMRKTSSIDASASSSAEYYDRTSQSGSLDENSDITIENGT 213
              :..|||...:|:.||..|                                    ||...:.|.
 Frog   127 --EPFPTEELETDDDIYSGL------------------------------------SDQIDDTGE 153

  Fly   214 EDIDDYIEDSLSNMCDSTIDNDAEDAGVETPLLSDCQGSHVRELSFDLALDVVSSTTDGASNAVT 278
            ||.|.|                            ||             :|              
 Frog   154 EDEDLY----------------------------DC-------------VD-------------- 163

  Fly   279 PTPESYARQSQSPLAAAAPSVPVSAAPGPPMGRLVSTSSSSSSLLVSESQRLQRAAAAVYNYRSS 343
                                                                             
 Frog   164 ----------------------------------------------------------------- 163

  Fly   344 MASTEHEYAYIYSEDDEKVYEDLCYVTFQAKAKPEVTTDNIACNGTGYDHTNTKEEEVYQDLCAL 408
                      :..|:..::||||    .:.:.:|...||                          
 Frog   164 ----------MEEEEGNEIYEDL----MKLEEQPAAPTD-------------------------- 188

  Fly   409 HRTSRSQTASSTSFEQRDYVIRELIDTESNYLDVLTALKTKFMGPLERHLNQDELRLIFPRIREL 473
                    ...||.:.|...::||..||..|.|.|.::...||.||:..|:|:|...||..|:||
 Frog   189 --------GKMTSDDMRRCCLQELYQTEEKYTDTLESITQYFMKPLQMFLSQNETNSIFINIKEL 245

  Fly   474 VDIHTKFLDKLRESLTPNAKVKMAQVFLDFREPFLIYGEFCSLLLGAIDYLADVCKKNQIIDQLV 538
            :.:|..||.:::......::..:.||||..:|.|||||.:||.:..|..:|.....:::.:...:
 Frog   246 LALHQVFLSEMKSCALYKSQQNLYQVFLRNKEKFLIYGTYCSQVESATKHLEKTSMEHEGVRMKL 310

  Fly   539 QKCERDYNVGKLQLRDILSVPMQRILKYHLLLDKLVKET-SPLHDDYRSLERAKEAMIDVSQYIN 602
            ::|.:..|.|:..|||:|.|||||:|||||||.:|||.| .|...|  :|:.:.:||.|::|.:|
 Frog   311 EECSQRANNGRFSLRDLLMVPMQRVLKYHLLLQELVKHTVDPTEKD--NLKLSLDAMRDLAQCVN 373

  Fly   603 EVKRDSDHLVIIQKVKDSICDIHLLQNGNGSDLLQYGRLLLDGELHIKAHEDQKTKL-RYAFVFD 666
            |||||::.|..|...:.||      :|...| |.||||...||||.:...| :|:|| ||||:.|
 Frog   374 EVKRDNETLKQITNFQLSI------ENLTDS-LAQYGRPKTDGELKVTTME-RKSKLDRYAFLLD 430

  Fly   667 KILIMVKALHIKTGDMQYTYRDSHNLADYRVEQSHSRRTIGRDT-RFKYQLLLARKSGKTAFTLY 730
            :.|::.|    :.|| .:..::...|.::::....|.   .:|. ::.:..||....|...:.||
 Frog   431 RALLICK----RKGD-TFDLKEFIKLQNFQIRDDSSG---DKDNKKWSHMFLLIDARGTLGYELY 487

  Fly   731 LKSEHERDKWRKALTEAMESLEPPGCQSTDHKMEIYTFDAPTTCRHCSKFLKGRIHQGYRCKVCQ 795
            .|:...:.||.:....|:.::.|....:..|..::::|:...||:.|...|:|...|||||..|:
 Frog   488 FKTRELKKKWMEQFEMALSNIYPDNALANGHDFQMFSFEDTATCKACQMLLRGLFFQGYRCCRCK 552

  Fly   796 ISVHKGCISSTGRC-----------KQNP----------------------VSVPPP-------- 819
            ...||.|:.....|           ||.|                      |.:|||        
 Frog   553 APAHKECLGRVPCCGKQDSGSSTIKKQKPGRGNNNKRNETGLTKMEACQEYVGIPPPPIAFGPPL 617

  Fly   820 -----------------------------------------VCD--RQLSEFNWFAGNMDRETAA 841
                                                     ||:  ..||.:.|:||.|:|..|.
 Frog   618 RMEKGVIVELTKAEADQHWWEGRNTSSNEIGFFPCSHVKPYVCNPVPDLSVYTWYAGPMERRDAE 682

  Fly   842 HRLENRRIGTYLLRVRPQGPSTAHETMYALSLKTDDNVIKHMKINQENSGDSMLYCLSSRRHFKT 906
            ..|.||..||||:|.|.:....     :|:|:|.:..| ||||:..:..    |:.|:.::.||.
 Frog   683 VLLANRSDGTYLVRQRVKDAGE-----FAISIKFNQEV-KHMKVTSQGG----LWRLTEKKGFKG 737

  Fly   907 IVELVSYYERNDLGENFAGLNQSLQWPYKEV----------------IATALYDYEPKAGSNQLQ 955
            :.:|:.||::|.|.:.|..|:..||.|:||.                .|.|.||:..: ...:|.
 Frog   738 LTDLIVYYQQNSLKDCFKLLDTMLQNPFKEPEKKDNPKTEKRMKYFGSARARYDFCAR-DRTELS 801

  Fly   956 LRTDCQVLVIGKDGDSKGWWRGKIGDTVGYFPKEYVQE 993
            |:....:.::.|.|.: |||:|::...||:||..||::
 Frog   802 LKEGDVIRILSKKGQN-GWWKGEVYGKVGWFPANYVED 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723 54/111 (49%)
RhoGEF 428..603 CDD:279015 66/175 (38%)
PH_Vav 624..753 CDD:269930 36/130 (28%)
PH 641..749 CDD:278594 29/109 (27%)
C1_1 761..804 CDD:278556 16/42 (38%)
SH2_Vav_family 824..934 CDD:198193 38/109 (35%)
SH3 940..993 CDD:302595 17/52 (33%)
vav1XP_002940062.1 CH 18..103 CDD:381763 41/84 (49%)
RhoGEF 197..373 CDD:238091 67/177 (38%)
PH_Vav 387..510 CDD:269930 38/138 (28%)
C1_1 518..567 CDD:365894 16/48 (33%)
SH3_VAV1_1 596..658 CDD:212912 4/61 (7%)
SH2 665..767 CDD:387587 39/111 (35%)
SH3_VAV1_2 785..838 CDD:212909 18/54 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5247
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3961
Inparanoid 1 1.050 452 1.000 Inparanoid score I1566
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313065at33208
OrthoFinder 1 1.000 - - FOG0001414
OrthoInspector 1 1.000 - - otm48207
Panther 1 1.100 - - LDO PTHR45818
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 1 1.000 - - X1295
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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