DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vav and mcf2l

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_012813354.1 Gene:mcf2l / 100497730 XenbaseID:XB-GENE-6042031 Length:1216 Species:Xenopus tropicalis


Alignment Length:1077 Identity:205/1077 - (19%)
Similarity:365/1077 - (33%) Gaps:362/1077 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LAMTLRDGVLLCNLVIHLDPSSLDPREFNRKPQMAQFLCSKNIKLFLDVCHNNFGIRDADLFEPT 114
            |.:.|..|..:.|.:       ::||:.|.:.:|.|                            .
 Frog   286 LKIALTQGCDILNKI-------MEPRKENPEYRMNQ----------------------------D 315

  Fly   115 MLYDLTNFHRVLITLS---------------KLSQCRKV-------QQLHPDLIGFNLQLSP--- 154
            .|.:.|...|:|:.|:               ||.||.::       :::...|.|.:.:|..   
 Frog   316 QLDNQTTVERLLLQLNETEAAFDEFWSKHEQKLEQCLQLRHFELNFREISTSLDGISERLEAFTD 380

  Fly   155 --TERSHSDEAIYKDLHSTDLNMRKTSSI------DASASSSAEYY------DRTSQSGSLDENS 205
              ...||: |.|.||..:.::..|:....      :......:.:|      .:..:.|.|.::.
 Frog   381 VGNSCSHA-EHILKDFCNFEVKSREVLQTAQNLVREGDQLIKSNHYAVDSILPKCDEIGHLCDSI 444

  Fly   206 DITIENGTEDIDDYIE-----DSLSNMCDSTI------------DNDAEDAGVE--TPLLSDCQG 251
            ..||:...:::...:|     :.....||..|            ..|..:|.::  |..|.....
 Frog   445 SNTIQQRRQNLHKSLELHRHLEKTMKWCDEGIFLLASQPVDKFQSQDGAEAALQEITRFLETGTD 509

  Fly   252 SHVRELSFDLAL--DVVSSTTDGASNAVTPTPESY-----ARQSQSPLAAAAPSVPVSAAPGPPM 309
            ..:::|:|.|.:  .:::.......|.|....||.     .|:......||..:.||.  |..|.
 Frog   510 ITMKDLAFILKMYNSILTPELQEHVNKVYQKQESMQEMFEKRKGSLRKLAAKQTRPVQ--PVAPR 572

  Fly   310 GRLVSTSSSSSSLL--VSESQRLQRAAAAVYNYRSSMASTEHEYAYIYSEDDEKVYEDLCYVTFQ 372
            ...:|.|.:||..|  .|||:....:.....|||                               
 Frog   573 PEAISKSPTSSPGLHRSSESRYSSGSIQRRINYR------------------------------- 606

  Fly   373 AKAKPEVTTDNIACNGTGYDHTNTKEEEVYQDLCALHRTSRSQTASSTSFEQRDYVIRELIDTES 437
             :||.||       :|:....|:..|:|  ::|..|.|                :|:.|||:||.
 Frog   607 -RAKSEV-------DGSQMRSTSVMEDE--ENLAVLRR----------------HVMNELIETER 645

  Fly   438 NY----LDVLTALKTKFMGPLERHL----NQDELRLIFPRIRELVDIHTKFLDKLRESLTPNAKV 494
            .|    |.|:.....:...||...|    .|::..::|..:.|:...|.:...:..|......::
 Frog   646 AYVEELLSVIEGYAAEMNNPLVMDLIPSVLQNKKDVLFGNMEEIYQFHNRIFLRELEHYRDYPEL 710

  Fly   495 KMAQVFLDFREPFLIYGEFC-------SLLLGAID--YLADVCKKNQIIDQLVQKCERDYNVGKL 550
             :.:.||:..|.|.||.::|       ||.....|  :..|..||   :|.            ||
 Frog   711 -VGRCFLERMEDFQIYEKYCQNKPRSESLWRQCSDAAFFQDCQKK---LDH------------KL 759

  Fly   551 QLRDILSVPMQRILKYHLLLDKLVKETSPLHDDYRSLERAKEAMIDVSQYINEVKRDSDHLVIIQ 615
            .|...|..|:|||.||.|||.:::|.:.    :....|..:||:..:             |.|::
 Frog   760 SLDSYLLKPVQRITKYQLLLKEMLKYSK----NCEGAEDLQEALASI-------------LGILK 807

  Fly   616 KVKDSICDIHLLQNGNGSDLLQYGRLLLDGEL-----HIKAHEDQKTKLRY------AFVFDKIL 669
            .|.||:..|.:  .|...:|.:.|:||:.|..     |.|.|...|...|:      .|:.:|.:
 Frog   808 AVNDSMHQIAI--TGYEGNLHELGKLLMQGSFNVWTEHKKGHSKVKDLARFKPMQRHLFLHEKAV 870

  Fly   670 IMVKALHIKTGDMQYTYRDSHNLADYRVEQSHSRRTIGRDTRFKYQLLLARKSGKTAFTLYLKSE 734
            :..|.            || .|...|....|:|         :|:.|.:.    ....|.|:|.:
 Frog   871 LFCKK------------RD-ENGEGYEKAPSYS---------YKHSLNMM----FVGITEYVKGD 909

  Fly   735 HER-DKWRKALTEAMESLEPPGCQSTDHKMEIYTFDAPTTCRHCSKFLKGRIHQGYRCKVCQISV 798
            :.: :.|..|                  :.|:|...||||     :.....:::..:....|:..
 Frog   910 NRKFEIWYNA------------------REEVYIVQAPTT-----EVKATWVNEIRKVLTSQLKA 951

  Fly   799 HKGCISSTGRCKQNPVSVPPPVCDRQLSEFNWFAGNM----DRET------------AAHRLENR 847
            |:.  :|..:..::..|:|.|: ....|.....:|.:    :|:|            ....||..
 Frog   952 HRD--ASHHKSAEHANSLPTPL-PSSTSPLRNKSGKIKKLEERKTEPLLNPDVSLTSVPKYLEKG 1013

  Fly   848 RIGTYL---------------------LRVRPQGPSTAHETMYALSLKTDD--------NVIKH- 882
            :.||..                     |:.:...|::..:......:|:|.        |...| 
 Frog  1014 KDGTVTSPTSDSSALSKKRFTLQGFSNLKSQKASPTSPDKKAKRHEVKSDPTPFGLRGWNRASHS 1078

  Fly   883 MKINQEN-----SGDSMLYCLSSRRHFKTIVELVSYYERNDLGENFAGLNQSLQWPYKEVIA--- 939
            :.:::||     ||:..:                   ..:|..|:..|     ..|.|::..   
 Frog  1079 LDVSEENNEDWSSGEDPI-------------------NSSDAEEDGGG-----DAPEKKLTPGKY 1119

  Fly   940 TALYDYEPKAGSNQLQLRT-DCQVLVIGKDGDSKGWW 975
            |.:.|||  .||::|.::: |...::..:||   |.|
 Frog  1120 TVVADYE--RGSDELLVKSGDLVHIIHEEDG---GMW 1151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723 14/96 (15%)
RhoGEF 428..603 CDD:279015 48/191 (25%)
PH_Vav 624..753 CDD:269930 28/140 (20%)
PH 641..749 CDD:278594 24/119 (20%)
C1_1 761..804 CDD:278556 8/42 (19%)
SH2_Vav_family 824..934 CDD:198193 21/160 (13%)
SH3 940..993 CDD:302595 12/37 (32%)
mcf2lXP_012813354.1 SEC14 77..222 CDD:214706
SPEC 353..561 CDD:238103 32/208 (15%)
RhoGEF 633..810 CDD:238091 51/225 (23%)
PH_Dbs 817..948 CDD:269934 33/181 (18%)
PTZ00108 <958..1104 CDD:240271 22/165 (13%)
SH3_DBS 1118..1171 CDD:212791 12/39 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.