DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vav and mcf2l2

DIOPT Version :10

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_073772492.1 Gene:mcf2l2 / 100149630 ZFINID:ZDB-GENE-100812-1 Length:1284 Species:Danio rerio


Alignment Length:1113 Identity:217/1113 - (19%)
Similarity:374/1113 - (33%) Gaps:356/1113 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GDLWRECV---AWLTRCKVIPPDHKAAQPDAEIRILAMTLRDGVLLCNLVIHLDPSSLDPREFNR 79
            |:....|:   |......::.||....|...| |:||                   .||..|   
Zfish   288 GNTLLSCIKDQATKAESHILNPDEVENQTTVE-RLLA-------------------QLDETE--- 329

  Fly    80 KPQMAQFLCSKNIKL--FLDVCHNNFGIRDADLFEPTMLYDLTNFHRVLITLSKLSQC-RKVQQL 141
             ....||....::||  .|.:.|.....::..:       .|......|:.||....| .:|:||
Zfish   330 -NAFEQFWSRHHLKLEQCLQLRHFEQDFKEVKV-------SLDGLSEALLGLSDTGDCVARVEQL 386

  Fly   142 HPDLIGFN------LQLSPTERSHSDEAIYKDLHSTD------LNMRKTSSIDASASSSAEYYDR 194
            ..:|....      |:.:..:..|.|:.|..:.::.|      :.:|:.  .|..::.:.:..|.
Zfish   387 LGELKTLEDKAQECLEKAQLQAQHGDQLIQSNHYAIDSIRPKCVELRRI--CDDFSNEAKKKRDV 449

  Fly   195 TSQSGSLDENSDITIENGTEDIDDYIEDSLSNMCDSTIDNDAEDAGVETPL---------LSDCQ 250
            .::|        :.|....::::.:.|..:..:....:|......|.|..|         ..:.|
Zfish   450 LTKS--------LEILKRIDEVNQWCESGVYLLASQAVDRCQTQEGAEAALQDIERYMKTAKEQQ 506

  Fly   251 GSHVRELS--FDLAL-DVVSSTTDGASNAVTPTPESYARQSQS----------PLAAAAPSVPVS 302
            .||::||:  :::.| :::.|....|...:....|.:.::..|          |:...||. |.|
Zfish   507 LSHLKELNNQYEVVLSELLKSKVQTALKTLNDVQEMFEKRHASLKKLSTKQTRPVQPVAPR-PES 570

  Fly   303 AA---------PGPPMGRLVSTSSSSSSLLVSESQRLQRAAAAVYNYRSSMASTEHEYAYIYSED 358
            :.         |.||.....:|.:||::...|:::..:|.     |.|                 
Zfish   571 SPKRPSPKIPHPTPPTSHRKTTDNSSTNRQPSDAELAKRK-----NIR----------------- 613

  Fly   359 DEKVYEDLCYVTFQAKAKPEVTTDNIACNGTGYDHTNTKEEEVYQDLCALHRTSRSQTASSTSFE 423
                           |||..:..:.:...|.|               .:.|....::|..|.| .
Zfish   614 ---------------KAKGGIKIEVMHEGGQG---------------GSSHILMNNETEESLS-N 647

  Fly   424 QRDYVIRELIDTESNYLDVLTALKTKFMGPLERHLNQDEL------------RLIFPRIRELVDI 476
            :|.:::.|||:||..|::.|.::...:...|:    ..||            .::|..:.|:...
Zfish   648 RRSHIMNELIETERLYVEELQSIIEGYAAALD----DPELIYLIPPSLENKKEVLFGNLPEIYQF 708

  Fly   477 HTK-FLDKLRESLTPNAKVKMAQVFLDFREPFLIYGEFCSLLLGAIDYLADVCKKNQIIDQLVQK 540
            |.| ||.:|..|......|  ...||..:|...||.::|.....: :.|...|..:...    |:
Zfish   709 HQKIFLKELENSAEKPELV--GTCFLKRKEELQIYEKYCQNKPRS-EALWRQCGDSMFF----QE 766

  Fly   541 CER--DYNVGKLQLRDILSVPMQRILKYHLLLDKLVKETSPLHDDYRSLERAKEAMIDVSQYINE 603
            |::  |:   ||.|...|..|:|||.||.|:|.:::| .|...:....||.|:..::|:.:.:| 
Zfish   767 CQKRLDH---KLSLDAYLLKPVQRITKYQLMLKEMLK-CSKNPEGTAELEEAQATVLDIIKSVN- 826

  Fly   604 VKRDSDHLVIIQKVKDSICDIHLLQNGNGSDLLQYGRLLLDGEL-----HIKAHEDQKTKLRY-- 661
               ||.|.:.|...:.|:.|:              |:||:.|..     |.|.|...|...|:  
Zfish   827 ---DSMHQIAITGFEGSLNDL--------------GKLLMQGSFNVWTDHKKGHSKVKDLARFKP 874

  Fly   662 ----AFVFDKILIMVKALHIKTGDMQYTYRDSHNLADYRVEQSHSRRTIGRDTRFKYQLLLARKS 722
                .|::.|:::..|    |..:|    .|.|       |:|.|       ..||:.|    |.
Zfish   875 MQRHLFLYHKMILFCK----KREEM----TDGH-------EKSPS-------YSFKHSL----KM 913

  Fly   723 GKTAFTLYLKSEHER-DKWRKALTEAMESLEPPGCQSTDHKMEIYTFDAPT-------------- 772
            |....|..:|.:.:: :.|...                  :.|:|...||:              
Zfish   914 GSVGITENVKGDIKKFEIWYNG------------------REEVYIIQAPSMDVKNTWVSEIRKV 960

  Fly   773 ------TCRHCSKFLKGRIHQGYRCKVCQISVHKGC--ISSTGRCKQNPVSVPPPVCDRQLSEFN 829
                  .||..|     ::||    |:.:...|...  :..|. .:|:..|.|.....|..|..|
Zfish   961 LTSQLEACREAS-----QLHQ----KITENIYHAPMRNMRKTA-LRQSDSSSPETGYRRSDSGPN 1015

  Fly   830 W------FAGNMDRETAA--------HRLENRRIGTYLLRVRPQ----------------GPSTA 864
            .      .:.::..|.||        ..|.|||    .|...|.                |.:||
Zfish  1016 MRQKRADASSSLGSERAALPRKRFTLQGLSNRR----SLPAEPAPKETEVTRRFSLASTVGSATA 1076

  Fly   865 HETMYALS---------LKTD------DNVIKHMKINQENSGDSMLYCLSSRRHFKTIVELVSYY 914
            ..|...||         :|:|      :...|.....:|...||    |.:.|..|         
Zfish  1077 PRTKAPLSSSLKSKRHQIKSDPTPFGYEGATKTRGFKKETMRDS----LPAERKSK--------- 1128

  Fly   915 ERNDLGENFAGLNQSLQ--WPYKEVIATALYDYEPKAGSNQLQLRTDCQVLVIGKDGDSKGWWRG 977
              ...|...|....:.|  |..:.:.:....|:|        .:.:..:.|.|..||:.:|  ..
Zfish  1129 --GSGGSKPAVPRSASQPGWSQRRLPSMDAEDFE--------TIPSSAEELSISSDGEDEG--HN 1181

  Fly   978 KIGDTVGY 985
            |.||...|
Zfish  1182 KNGDNDRY 1189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH_VAV 19..135 CDD:409050 22/120 (18%)
RhoGEF 428..602 CDD:459876 48/188 (26%)
PH_Vav 624..753 CDD:269930 27/140 (19%)
C1_VAV 759..810 CDD:410360 12/72 (17%)
SH2_Vav_family 824..934 CDD:198193 30/156 (19%)
SH3 940..993 CDD:473055 11/46 (24%)
mcf2l2XP_073772492.1 None

Return to query results.
Submit another query.