DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vav and si:dkey-65j6.2

DIOPT Version :9

Sequence 1:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_009295405.2 Gene:si:dkey-65j6.2 / 100148904 ZFINID:ZDB-GENE-090313-319 Length:1588 Species:Danio rerio


Alignment Length:567 Identity:126/567 - (22%)
Similarity:211/567 - (37%) Gaps:162/567 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 DSLSNMCDSTIDNDAEDAGVETPLLSDCQGSHVRELSFDLALDVVSSTT-----------DGASN 275
            |..:..||:|...|.|...|..   |:.:.:..|        |.:.:|.           |..:.
Zfish   960 DWTTGQCDATALEDEERECVPE---SETRANRSR--------DSIHNTVTCFNFRSKPRRDSKNT 1013

  Fly   276 AVT-PTPESYARQSQSPLAAAAPSVPVSAAPGPPMG-------RLVSTSSS-SSSLLVSESQRLQ 331
            |.| .||...:::.:|....|||.  ..|..|.|:|       ..|:.||| .|.|.::|.  :|
Zfish  1014 ATTRETPADCSQRGRSSSRRAAPE--QRAVSGAPVGCQWFPWQNTVNRSSSRRSELHITEP--IQ 1074

  Fly   332 RAAAAVYNYRSSMASTEHEYAYIYSEDDEKVYEDLCYVTFQAKAKPEVTTDNIACNGTGYDHTNT 396
            |        .:|.:|..|:                              |...|....|.:..:|
Zfish  1075 R--------HNSFSSQTHD------------------------------THGDAWRNEGENTADT 1101

  Fly   397 KEEEVYQDLCALHRTSRSQTASSTSFEQRDYVIRELIDTESNYLDVLTALKTKFMGPLERHLNQD 461
            .|.           .|||...      ||  ::.||:.||..|:..|..:.|.:...|.|.....
Zfish  1102 HES-----------PSRSMKL------QR--IMEELLLTEVEYVRSLGYILTHYYPLLSRPDVPQ 1147

  Fly   462 ELR----LIFPRIRELVDIHTKFLDKLRESLTPNAKVKMAQVFLDFREPFLIYGEFCSLLLGAID 522
            :||    .||..:.:|.|.|.:...:..::.... .::..:.||:.||.|.:|..:         
Zfish  1148 DLRGQRGRIFGNLEKLYDFHCQHFQQELQACQAE-PLRAGRCFLNHRESFGLYALY--------- 1202

  Fly   523 YLADVCKKNQIIDQLVQKCERDYNVGKLQLRDILSV------PMQRILKYHLL----LDKLVKET 577
                 .|.....|.|:|. .|.:...:|:|.|.:.:      |:|||.||.||    ||:.|.:.
Zfish  1203 -----SKNKPQSDALIQH-HRYFKRKQLELGDSMDLSSYLLKPVQRISKYSLLLQEILDECVSDQ 1261

  Fly   578 SPLHDDYRSLERAKEAMIDVSQYINEVKRDSDHLVIIQKVKDSICDIHLLQNGNGSDLLQYGRLL 642
            ||..::.       :|.::|.::  :::..:| |:.:..::|  ||::|.:.         |:|:
Zfish  1262 SPEREEI-------QAALEVVRF--QLRHGND-LLTMDAIRD--CDLNLNEQ---------GQLI 1305

  Fly   643 LDGELHIKAHEDQKTKLRYAFVFDKILIMVKALHIKTGDMQYTYRDSHNLADYRVEQSHS----- 702
            ...|..:...  :|..||..|:|..:::..|......||..|.|:.|....:..:.||..     
Zfish  1306 RQDEFWVIFR--KKRSLRRVFLFQDVILFTKTKKNDRGDDVYVYKLSIKTCEIGMTQSCGLSGRS 1368

  Fly   703 -----RRTIGRDTRFKYQLLLARKSGKTAFTLYLKSEHERDKWRKAL 744
                 ||...:||   |.|....:..|.|:|    ::.|...|.:||
Zfish  1369 FEIWFRRRRSQDT---YILQAETRDIKHAWT----TDLEHILWEQAL 1408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VavNP_001097030.1 CH 20..132 CDD:278723
RhoGEF 428..603 CDD:279015 45/188 (24%)
PH_Vav 624..753 CDD:269930 30/131 (23%)
PH 641..749 CDD:278594 28/114 (25%)
C1_1 761..804 CDD:278556
SH2_Vav_family 824..934 CDD:198193
SH3 940..993 CDD:302595
si:dkey-65j6.2XP_009295405.2 SPEC 634..>803 CDD:321951
RhoGEF 1114..1283 CDD:306973 45/193 (23%)
PH_puratrophin-1 1276..1411 CDD:270062 35/156 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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