DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hs3st-B and ndst1

DIOPT Version :10

Sequence 1:NP_573370.1 Gene:Hs3st-B / 32918 FlyBaseID:FBgn0031005 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001011159.1 Gene:ndst1 / 496577 XenbaseID:XB-GENE-955052 Length:878 Species:Xenopus tropicalis


Alignment Length:319 Identity:91/319 - (28%)
Similarity:143/319 - (44%) Gaps:62/319 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 PPAQTVTSSLDGAPKY-QL-------LRQQGLRPSRH------------LPDTLIIGVKKSGTRA 146
            ||.|.       |.|| |:       |.|......||            .|..||||.:|:||.|
 Frog   558 PPVQL-------AHKYFQIFPEEKDPLWQDPCEDKRHKDIWSKEKTCDRFPKLLIIGPQKTGTTA 615

  Fly   147 LLEFIRLHPDVRA------AGSEVHFFD-RHYQRGLRWYRHHMPYTIEGQIT----MEKTPSYFV 200
            |..|:.:|.|:.:      ...|:.||: ::|.:|:.|:....|  |....|    .||:.:||.
 Frog   616 LYLFLGMHSDLSSNYPSSETFEEIQFFNGQNYHKGIDWFMEFFP--IPSNTTSDFYFEKSANYFD 678

  Fly   201 TKEVPQRVYHMNPATKLLIVVRDPVTRAISDY--TQAASKKADMKLFEQLAFVNGSYSVVDTNWG 263
            ::..|:||..:.|..|::.::.:|..||.|.|  .:|......||...|.....|..:       
 Frog   679 SELAPRRVAALLPKAKIITILINPADRAYSWYQHQRAHDDPVAMKYTFQEVITAGPEA------- 736

  Fly   264 PVKI----------GVYARYLERWLLYFPLSQLLFISGERLIMDPAYEIGRVQDFLGLKRVVT-E 317
            |.::          |.|:.::|||:.:|..:|:|.:.|:.|..:||..:..||.|||:...:. .
 Frog   737 PQRLRALQNRCLVPGWYSTHIERWMNHFHANQILVLDGKLLRTEPANVMETVQKFLGVTNAMDYH 801

  Fly   318 KHFYFNATKGFPCLFKSEARSTPHCLGKTKGRNHPHIDPGAIERLREFYRPFNNKFYQL 376
            |...|:..|||.|......|:  .||||:|||.:|.:|..:...|.::||..|.:..:|
 Frog   802 KTLAFDPKKGFWCQLLDGGRT--KCLGKSKGRKYPDMDSDSRSFLMDYYRDHNIELSKL 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hs3st-BNP_573370.1 Sulfotransfer_1 131..368 CDD:425820 77/260 (30%)
ndst1NP_001011159.1 Sufficient for localization to Golgi membrane. /evidence=ECO:0000250|UniProtKB:P52848 1..169
Heparan sulfate N-deacetylase 1 40..594 11/42 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 47..71
HSNSD 81..511 CDD:463450
Heparan sulfate N-sulfotransferase 1 595..878 80/275 (29%)
Sulfotransfer_1 601..851 CDD:425820 78/260 (30%)
Blue background indicates that the domain is not in the aligned region.

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