DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc18B and leo1

DIOPT Version :10

Sequence 1:NP_573365.1 Gene:Muc18B / 32913 FlyBaseID:FBgn0031000 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_996950.1 Gene:leo1 / 404599 ZFINID:ZDB-GENE-040426-2435 Length:696 Species:Danio rerio


Alignment Length:162 Identity:31/162 - (19%)
Similarity:60/162 - (37%) Gaps:19/162 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SNLDESTTEKPATEAPGTTEKVTTAAPGTTEKVTTEAPGTTEKITTEAPGTTEKITTEAPGTTEK 158
            |..:.|..:..||........::.|..|..:....:..|....:.:.|.|...:.:....|    
Zfish   114 SQSERSGNQSDATMHSDNEHSMSEAHRGEQDDEDDDDRGHRSDVGSPASGAGSRRSDRGSG---- 174

  Fly   159 ITTEAPGTTEKITTEAPGTTEKPATDAPGTTEKPATDAPGTTEKSETTD----APGTTDKSDTDA 219
                :||:    ...:|.:........|||   |.||..|:.:.:.:.|    ..|.:|:|:.:.
Zfish   175 ----SPGS----EAGSPRSEAGSGHSDPGT---PHTDGEGSGKDAHSGDEKWGGDGKSDQSEDED 228

  Fly   220 PITDEPSTAETSTDEPNTETTESGEETTIEDN 251
            ...:.....|.|.:|...:.:||.:.:..||:
Zfish   229 KQQNSDDERERSDEEGERQKSESIKGSDSEDD 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc18BNP_573365.1 CBM_14 26..72 CDD:426342
motB <90..208 CDD:183756 21/117 (18%)
leo1NP_996950.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..336 31/162 (19%)
MSCRAMM_ClfA <3..339 CDD:468110 31/162 (19%)
Leo1 352..514 CDD:461126
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..560
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..696
Blue background indicates that the domain is not in the aligned region.

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