DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc18B and Leo1

DIOPT Version :9

Sequence 1:NP_001285431.1 Gene:Muc18B / 32913 FlyBaseID:FBgn0031000 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001005548.1 Gene:Leo1 / 300837 RGDID:1549772 Length:678 Species:Rattus norvegicus


Alignment Length:92 Identity:20/92 - (21%)
Similarity:38/92 - (41%) Gaps:17/92 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 EKITTEAPGTT--EKPATDAPGTTEKPATDAPGTTEKSETTDAPGTTDK-----SDTDAPITDEP 225
            ::::.|..|.:  |:||          |:|.....:.|:..|.|..:|:     ||.:.|...:.
  Rat   214 QQLSEEEKGNSDDERPA----------ASDNDEEKQNSDDEDRPQVSDEEKMQNSDDERPQVSDE 268

  Fly   226 STAETSTDEPNTETTESGEETTIEDNV 252
            ....:..:|...:.:||...:..||.|
  Rat   269 DRRHSDDEEEQDQKSESARGSDSEDEV 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc18BNP_001285431.1 CBM_14 26..72 CDD:279884
MCLC <77..177 CDD:283562 1/8 (13%)
Leo1NP_001005548.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..373 20/92 (22%)
PHA02664 <33..183 CDD:177447
PHA02664 <134..259 CDD:177447 11/54 (20%)
Leo1 386..544 CDD:281933
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 559..596
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 613..678
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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