DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc18B and Ibsp

DIOPT Version :10

Sequence 1:NP_573365.1 Gene:Muc18B / 32913 FlyBaseID:FBgn0031000 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_036719.2 Gene:Ibsp / 24477 RGDID:2855 Length:319 Species:Rattus norvegicus


Alignment Length:193 Identity:47/193 - (24%)
Similarity:62/193 - (32%) Gaps:34/193 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 EARDDSNIENPTIPPSNLDESTTEKPATEAPGTTEKVTTAAPGTTEKVTTEAPGTTEKITTEAPG 143
            |..:.||.|.     :|.|....|....||...|....||:.|..   ||...|..|....:.|.
  Rat    81 EEEETSNEEE-----NNEDSEGNEDQEAEAENATLSGVTASYGVE---TTADAGKLELAALQLPK 137

  Fly   144 TTEKITTEAPGTTEKITTEAPGTTEKITTE--------------APGTTEKPATDAP--GTTEKP 192
            .......:||...|....|.....|:...|              :..:||....:.|  |...:.
  Rat   138 KAGDAEGKAPKMKESDEEEEEEEEEENENEEAEVDENEQVVNGTSTNSTEVDGGNGPSGGDNGEE 202

  Fly   193 ATDAPGTTEKSE--TTDAPGTTDKSDTDAPI------TDEPSTAETSTDEP--NTETTESGEE 245
            |.:|..|...:|  |..|...|....|.|.:      |..|..|..:|..|  .:.|.|.|||
  Rat   203 AEEASVTEAGAEGTTAGARELTSYGTTTAVLLNGFQQTTPPPEAYGTTSPPARKSSTVEYGEE 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc18BNP_573365.1 CBM_14 26..72 CDD:426342
motB <90..208 CDD:183756 29/135 (21%)
IbspNP_036719.2 BSP_II 17..316 CDD:461651 47/193 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..116 11/39 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 135..224 17/88 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..263 7/25 (28%)
Integrin-binding motif. /evidence=ECO:0000250|UniProtKB:P21815 288..290
Blue background indicates that the domain is not in the aligned region.

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