DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc18B and T24E12.10

DIOPT Version :9

Sequence 1:NP_001285431.1 Gene:Muc18B / 32913 FlyBaseID:FBgn0031000 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_494646.2 Gene:T24E12.10 / 188866 WormBaseID:WBGene00020777 Length:1318 Species:Caenorhabditis elegans


Alignment Length:246 Identity:48/246 - (19%)
Similarity:86/246 - (34%) Gaps:74/246 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 QSIAAFEARDDSNIENPTIPP--SNLDESTTEKP-----------ATEAPGTTEKVTTAAPGT-- 122
            |.:..:||.||:::...::.|  .:...:||.:|           |.:.|..:  |.|.|..:  
 Worm   355 QEVQDYEAEDDNDLSAQSVAPVAESFSSATTSEPQEIVEIQEHHAAHQLPAVS--VATFAETSDN 417

  Fly   123 --TEKVTTEAP----------GTTEKITTEAPGTTEKI----TTEAPGTTEKITTEAPGTTE--- 168
              |::::.|||          ...|:|:....|....:    |:::|...:.:..:.....:   
 Worm   418 KATDEMSMEAPDDHQFSIHWVSNFEEISFSPDGYNSLMDPLETSQSPEVRDYVNEDGHDFCDSLI 482

  Fly   169 --KITTEAPGTTEKPATDAPGT----------------------------TEKPAT-DAPGTTEK 202
              |..:::....|..|.||..:                            :..||: |||  .|:
 Worm   483 KPKELSQSTKVREAQAEDAAPSVSPNYEASLASDEALCEIVVEVQEDRQFSSSPASHDAP--IEQ 545

  Fly   203 SETTDAPGTTDKSDTDAPITDEPSTAETSTDEPNTETTE--SGEETTIEDN 251
            .||:.:|......|.:|......|.|.......|.||..  |.|   :.||
 Worm   546 QETSQSPENQYDIDEEAHHLSTQSVAPVKAFLANDETPHEISAE---VHDN 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc18BNP_001285431.1 CBM_14 26..72 CDD:279884
MCLC <77..177 CDD:283562 23/135 (17%)
T24E12.10NP_494646.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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