DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Muc18B and LOC1277410

DIOPT Version :10

Sequence 1:NP_573365.1 Gene:Muc18B / 32913 FlyBaseID:FBgn0031000 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_061500895.1 Gene:LOC1277410 / 1277410 VectorBaseID:AGAMI1_005341 Length:2808 Species:Anopheles gambiae


Alignment Length:214 Identity:60/214 - (28%)
Similarity:81/214 - (37%) Gaps:51/214 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 EARDDSNIENPTI---PPSNLDESTTEKPATEAPGTTEKVTTAAPGTTEKV-----------TTE 129
            :|.||....:.|:   .||:: |...|.||.||  ||.:||..|....|.|           ||.
Mosquito  1298 QAEDDDEPSSTTVRADKPSSV-EQDEEGPAQEA--TTARVTETATEQEESVTEFETKRKTIQTTV 1359

  Fly   130 APGTT--EKITTEAPGTTEKITTEAPGTTE---------KITTEAPGTTEKITTEAPGTTEKPA- 182
            ||.|.  ::...|...||.:....|....|         |:|.|...|.:.....|..||.:|. 
Mosquito  1360 APTTVSEQQDDLEKTETTTQPAASAAAADELQEEEHQEVKLTDEPELTEDDAQESAAATTSRPTG 1424

  Fly   183 --------TDAPGTTEKPA----TDAPGTTEKSETTDAPGTTDKSDTDAPITDEPSTA-ETSTDE 234
                    ...|.||.||:    .:.||||..|       .|.:.::|.|:......| |...||
Mosquito  1425 QEEASTQYDHVPDTTHKPSEAHDDEQPGTTVSS-------VTSEKESDVPVAVTVQAAMEQEDDE 1482

  Fly   235 PNTETTE--SGEETTIEDN 251
            ..::|||  :...||...|
Mosquito  1483 DVSKTTEATAAHSTTASSN 1501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc18BNP_573365.1 CBM_14 26..72 CDD:426342
motB <90..208 CDD:183756 44/155 (28%)
LOC1277410XP_061500895.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.