DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ulp1 and Senp3

DIOPT Version :10

Sequence 1:NP_573362.1 Gene:Ulp1 / 32910 FlyBaseID:FBgn0027603 Length:1513 Species:Drosophila melanogaster
Sequence 2:NP_001013134.2 Gene:Senp3 / 303245 RGDID:1312040 Length:568 Species:Rattus norvegicus


Alignment Length:676 Identity:135/676 - (19%)
Similarity:233/676 - (34%) Gaps:183/676 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   868 TGTGFQAQNGKGFGAGRQ----PENSFLSQKRRNQEENPRLIKYRRVDNSFPRLITNETAEDLIP 928
            :|.||....|.|.....:    |..||.:.....:||                    |..||   
  Rat    42 SGGGFGPDPGSGTTVPTRRLPGPRPSFDASASEEEEE--------------------EEEED--- 83

  Fly   929 NNSMAKRDQPQSSKRLSIFNPPVYTQHRVRNDAPHVPTPFDDEESSQRLANAGPSSRPMTYSDAV 993
                   ::..::.||    ||.:.|... :..|....|...:..|||...|..:.:.:.||.:.
  Rat    84 -------EEEVAAWRL----PPRWGQLGT-SQRPRALRPSHRKTCSQRRRRAMRAFQMLLYSKST 136

  Fly   994 RLGHNGISESRVNGHSSHTVRREPSRLHRSILSHEMNCKDQEQYNELIRTQTNYVGSRYLKPGTP 1058
            .|..:.....|..|             .|..|:|..|                     :|.|   
  Rat   137 SLTFHWKLWGRHRG-------------RRRNLAHPKN---------------------HLSP--- 164

  Fly  1059 PTFQRAKAQSATSSSCSLQDNQSNITDSFPSPHGRANPELTEYAKLINRQENEENRSPAPQQPKR 1123
               |...|.....|.|.          .|.||.|...|.|.....|: .::......|.|..|..
  Rat   165 ---QEGGATPQVPSPCC----------RFDSPRGLPPPRLGLLGALM-AEDGMRGSPPVPSGPPM 215

  Fly  1124 NASNSSASHASTIS-SSASSSCS-------------------------TCSTCSSSDTEPMLVKD 1162
            .......:..|.:. .|...||:                         ..:.||..|      ..
  Rat   216 EEDGLRWTPKSPLDPDSGLLSCTLPNGFGGLSGPEGERSLAPPDASILISNVCSIGD------HV 274

  Fly  1163 SPEVKEANEANEANEANEANETKENDAPQPTTTRIKKPDFLHRRFANCI-FLRNDFAENFKARAN 1226
            :.|:.::::...|.||:...|.....:|            |......|: .:.::|.:.:.:   
  Rat   275 AQELFQSSDLGTAEEADRPGEKAGQHSP------------LREEHVTCVQSILDEFLQTYGS--- 324

  Fly  1227 RRQLESMHLLGIAEQQANESKDERLAYEKKLREVMFRSGAPHRPFFEIGPLEQPEEKKETKLIPL 1291
                    |:.::..:..|          ||.::..:              |.....:::.::.|
  Rat   325 --------LIPLSTDEVVE----------KLEDIFQQ--------------EFSTPSRKSLVLQL 357

  Fly  1292 TKEDHARFQEMTTIEVTTNLIFKYNLQI-TTDDIFTFVDGEWLNDAIINFYMSMLTERSEKRAGE 1355
            .:.    :|.|....:.......|...: |.||:.|.....||||.::|.|..::.:...::   
  Rat   358 IQS----YQRMPGNAMVRGFRVSYKRHVLTMDDLGTLYGQNWLNDQVMNMYGDLVMDTVPEK--- 415

  Fly  1356 LPATYAMNTFFMPRLLQAGYAGVRRWTRKVDLFSKDIIPVPVHCGNVHWCMAIIHLRNKTIFYYD 1420
               .:..|:||..:|...||.||:|||:.||:|:|:::.:|:|. .|||.:..:.:|.:||.|:|
  Rat   416 ---VHFFNSFFYDKLRTKGYDGVKRWTKNVDIFNKELLLIPIHL-EVHWSLVSVDVRRRTITYFD 476

  Fly  1421 SMGRPNQPALDALVKYLHEESLDKRKQPFDMTGFVVENAQNIPRQGNSSDCGVFSCMFAEYITRD 1485
            |....|:.....:.|||..|::.|.:..|.. |:......|:.||.|.||||.|...:.:::...
  Rat   477 SQRTLNRRCPKHIAKYLQAEAVKKDRLDFHQ-GWKGYFKMNVARQNNDSDCGAFVLQYCKHLALS 540

  Fly  1486 VPITFSQAEMLYFRTKMALEIADGKL 1511
            .|.:|:|.:|...|.::..|:...||
  Rat   541 QPFSFTQQDMPKLRRQIYKELCHCKL 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ulp1NP_573362.1 sbcc <294..>551 CDD:129705
Peptidase_C48 1331..1506 CDD:397169 54/174 (31%)
Senp3NP_001013134.2 SENP3_5_N <284..382 CDD:466160 17/148 (11%)
Peptidase_C48 394..566 CDD:397169 55/179 (31%)
Blue background indicates that the domain is not in the aligned region.

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