DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7990 and pgap-2

DIOPT Version :9

Sequence 1:NP_573361.1 Gene:CG7990 / 32909 FlyBaseID:FBgn0030997 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001369853.1 Gene:pgap-2 / 188041 WormBaseID:WBGene00007045 Length:263 Species:Caenorhabditis elegans


Alignment Length:247 Identity:74/247 - (29%)
Similarity:120/247 - (48%) Gaps:32/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 LPLVTLFTCFVTAYVFQYDDVHETHCRVYNIIPSIS-AITGVSPQRYFWRFSIALHIGPRIPIAF 148
            ||...|..|.:.:.:..:|....|||.|.|.:|||| |::..:|::|.||..|.||||||:.:|.
 Worm    23 LPSSALLICVILSLLLHFDQATSTHCEVANWLPSISAAVSTYTPEKYIWRILIGLHIGPRLVVAI 87

  Fly   149 VYKNY-YRSQLRRISPAQVPQTSLLITLILVLNCIEIASLGGVTYISNRENYPVHERIFITFMVC 212
            .::|: ..|.||.::..:  :...|..|...||.:|...|..:|.||:.|::.:|.:.|..|.:|
 Worm    88 AFRNFLLGSPLRPLTGHK--RLRFLCNLACFLNLLENFFLLALTSISSSEDHSLHAKCFGGFAIC 150

  Fly   213 SLCYMLATIKL------NGILNAGQALSEKQLLSIKWKKILFAVSILSTVGLLVFFA------KH 265
            |:.|||.:..|      ....|.||...|.::|.             :.:.:|.||.      :|
 Worm   151 SIIYMLLSTWLFNETGRRTATNLGQRSHEYKILG-------------AAIFVLCFFLGAYLYWRH 202

  Fly   266 RFYCHDLAFSWFAFFEYLIAIANMLFHFTIIWDFPSQFMMIVQ---GPRENL 314
            ..||....::.||..||...::|:.||.|:.:||..:.:::..   |...||
 Worm   203 NTYCEPGIYTLFALVEYSAVLSNIFFHCTLYYDFHGKNIVLTSSFGGGHYNL 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7990NP_573361.1 Frag1 74..300 CDD:287278 70/228 (31%)
pgap-2NP_001369853.1 Frag1 12..239 CDD:402067 71/230 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3979
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003719
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R277
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.800

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