DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14194 and Tmem60

DIOPT Version :10

Sequence 1:NP_573360.1 Gene:CG14194 / 32908 FlyBaseID:FBgn0030996 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001178539.1 Gene:Tmem60 / 296761 RGDID:1308939 Length:133 Species:Rattus norvegicus


Alignment Length:170 Identity:33/170 - (19%)
Similarity:59/170 - (34%) Gaps:57/170 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 IFVTLFALRLDNYIDWPYWAIFTPLWIWKCTAILGAIVGAIVWCRYPHYRLEGDAYTQFKAMLIS 87
            :|:.:..|:||....|.::.||.|:||:....::..||.....|:.......|....:.||.   
  Rat    18 LFLIMLVLKLDEKAPWNWFLIFIPVWIFDTILLVMLIVKMAGRCKSGFDPRHGSHNIKKKAW--- 79

  Fly    88 LALHLILLMFELLACDKLTSDRHLWVLVFIPLIFGSVVSVGACVWAVKHDRSFELELFLAVNALQ 152
               :||.::.:|..|                                                  
  Rat    80 ---YLIAMLLKLAFC-------------------------------------------------- 91

  Fly   153 FVSLPLKLDRFVYWNWDVVFVPMWIVICLSLVSVLYNIIF 192
             ::|..||:.|...|...||:|:|.::..:|..:.||:.|
  Rat    92 -LALCAKLEHFTTINLSYVFIPLWALLAGALTELGYNVFF 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14194NP_573360.1 Tmemb_185A 30..253 CDD:402059 32/163 (20%)
Tmem60NP_001178539.1 TMEM203 25..>118 CDD:448049 28/149 (19%)

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