DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1D3csd and cbx7a

DIOPT Version :10

Sequence 1:NP_573358.1 Gene:HP1D3csd / 32906 FlyBaseID:FBgn0030994 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001017853.2 Gene:cbx7a / 550551 ZFINID:ZDB-GENE-050417-400 Length:393 Species:Danio rerio


Alignment Length:112 Identity:23/112 - (20%)
Similarity:44/112 - (39%) Gaps:21/112 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PAEE--EKQKENDQQKENDQQKENDQQEEV---QEEPTKDESKEAGSTPPPKHMGVHNSARAELA 76
            ||::  |.....|:||...::...|::...   |:.|:..|..|          |.::||..|..
Zfish   160 PAKDCTENAWNEDEQKRKVKKMRKDEENTTQVHQDIPSGQEMSE----------GYNSSAEQESE 214

  Fly    77 RLLVE-----LLVQQAELDATNGGSVSGNLDGGNSNESQPLNVPPTD 118
            ..:.|     .:..|.|..:.:.|:..|..:.....:::. |.|.|:
Zfish   215 ITIKEDENCSSIFDQEEKPSEDTGTAIGAPESSTITDTEK-NEPVTN 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1D3csdNP_573358.1 None
cbx7aNP_001017853.2 CD_Cbx7 7..62 CDD:349293
CBX7_C <358..382 CDD:465385
Blue background indicates that the domain is not in the aligned region.

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