DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1D3csd and cbx7

DIOPT Version :10

Sequence 1:NP_573358.1 Gene:HP1D3csd / 32906 FlyBaseID:FBgn0030994 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001005071.1 Gene:cbx7 / 448638 XenbaseID:XB-GENE-942584 Length:245 Species:Xenopus tropicalis


Alignment Length:48 Identity:13/48 - (27%)
Similarity:25/48 - (52%) Gaps:4/48 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 AIENVMYSYMLGDTVYFIVTWKG--SKWGEAVPVQEIKHVHPKLLIDY 171
            |:|::....:....|.::|.|||  .|:....|.:.|  :.|:|::.|
 Frog    12 AVESIRKKRIRKGKVEYLVKWKGWPPKYSTWEPEEHI--LDPRLVLAY 57

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1D3csdNP_573358.1 None
cbx7NP_001005071.1 CD_Cbx7 7..62 CDD:349293 13/48 (27%)
CBX7_C 202..234 CDD:465385
Blue background indicates that the domain is not in the aligned region.

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