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Protein Alignment HP1D3csd and HP1b

DIOPT Version :10

Sequence 1:	NP_573358.1	Gene:	HP1D3csd / 32906	FlyBaseID:	FBgn0030994	Length:	179	Species:	Drosophila melanogaster
Sequence 2:	NP_572521.2	Gene:	HP1b / 31834	FlyBaseID:	FBgn0030082	Length:	240	Species:	Drosophila melanogaster

Alignment Length:	184	Identity:	37/184 - (20%)
Similarity:	61/184 - (33%)	Gaps:	74/184 - (40%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 KENSPNNKNTGGFPAEEEKQKENDQQKENDQQKENDQQEEVQEEPTK--------DESKEAGSTP 60
            :|:..|||.      |.:|:.......|:.:.|.....|:..||..|        :.||..|:|.
  Fly    51 EESLKNNKK------ETKKRLSTSSTPESIRSKRKSFLEDDTEEQKKLIGFERGLEASKILGATD 109

  Fly    61 PPKH----MGVHNSARAEL--ARL----LVELLVQ--------------------QAELDATNG- 94
            ...|    |....|..|:|  |:|    ..::::|                    ...|.::.|
  Fly   110 SSGHLMFLMKWKGSDHADLVPAKLANTRCPQVVIQFYEERLTWHTGSGNGNGNTNSVNLGSSGGL 174

  Fly    95 GSVSG-------------------NLDGGNSNESQPL----------NVPPTDA 119
            |||.|                   |:|||:..:.:|.          |:.|.::
  Fly   175 GSVGGSGAGDDTAPGSVGTTGGGSNIDGGDEEDPEPASPIGSINQDENIKPDES 228

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.