DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1D3csd and cec-1

DIOPT Version :10

Sequence 1:NP_573358.1 Gene:HP1D3csd / 32906 FlyBaseID:FBgn0030994 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_498862.1 Gene:cec-1 / 176190 WormBaseID:WBGene00000414 Length:304 Species:Caenorhabditis elegans


Alignment Length:101 Identity:22/101 - (21%)
Similarity:42/101 - (41%) Gaps:32/101 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EEEKQKENDQQKENDQQKENDQQEEVQEEPTKDESKE---------------------AGSTPPP 62
            |:||::|.|.|.|:::.::.:::|:|:|:..::|.:|                     |.:||.|
 Worm   193 EDEKEEEEDVQLESEKNEKEEEEEKVEEKKEEEEEEEEEEIQLVIVEKTVIETTIVEPAVATPEP 257

  Fly    63 KHMGVHNSARAELARLLVELLVQQAELDATNGGSVS 98
            ........|           :|:.....|..|.|.|
 Worm   258 SEPSSSEKA-----------VVENGSSSAAAGNSAS 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1D3csdNP_573358.1 None
cec-1NP_498862.1 CD_CSD 8..55 CDD:349274
Blue background indicates that the domain is not in the aligned region.

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