DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1D3csd and Cbx5

DIOPT Version :10

Sequence 1:NP_573358.1 Gene:HP1D3csd / 32906 FlyBaseID:FBgn0030994 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_031652.1 Gene:Cbx5 / 12419 MGIID:109372 Length:191 Species:Mus musculus


Alignment Length:56 Identity:13/56 - (23%)
Similarity:28/56 - (50%) Gaps:12/56 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 IENVMYSYMLGDTVYFIVTWKG-----SKWGEAVPVQEIKHVH-PKLLIDYIKSLK 176
            :|.|:...|:...|.:::.|||     :.|      :..|::. |:|:.:::|..|
Mouse    22 VEKVLDRRMVKGQVEYLLKWKGFSEEHNTW------EPEKNLDCPELISEFMKKYK 71

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1D3csdNP_573358.1 None
Cbx5NP_031652.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
CD_HP1alpha_Cbx5 19..68 CDD:349298 11/51 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..117 1/2 (50%)
CSD_HP1alpha_Cbx5 116..173 CDD:349302
Blue background indicates that the domain is not in the aligned region.

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