DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and qmcA

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_415022.1 Gene:qmcA / 947257 ECOCYCID:G6265 Length:305 Species:Escherichia coli


Alignment Length:309 Identity:83/309 - (26%)
Similarity:147/309 - (47%) Gaps:55/309 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VLIFIITSPIAIFICF-------KVVAEYERAIIFRLGRLSGGARGPGMFFILPCIDEY-RKVDL 130
            :||||   ||.||:..       |:|.:..:..:.|.||.:...: ||:..::|.:|.. ||:::
E. coli     1 MLIFI---PILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQ-PGLSLVVPFMDRIGRKINM 61

  Fly   131 RTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGTRNLS 195
            .....::|.||:::||:..||:|||.:.::.|...|..:|.:..::...|..|.:|.::|:..|.
E. coli    62 MEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELD 126

  Fly   196 ELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAARDAR-------- 252
            |:|::|:::...:...:||||.|||:.|.|:||:||..|..:..:|.|:.:|.|..|        
E. coli   127 EMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEG 191

  Fly   253 ---AKVIAAEGEKKS--------------------------ATALKEASDVISASPSA-----LQ 283
               |:::.|||||:|                          |.|.|..|:.|::....     :.
E. coli   192 IRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVA 256

  Fly   284 LRYLQTLSSISAEKNSTII-FPLPMELLTPYLAKYAHLMGPPPELKQSP 331
            .:|.:.|..|.:..||.:: .||....|...:|..|.|:......:..|
E. coli   257 QKYTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSANKRTQP 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 66/250 (26%)
qmcANP_415022.1 HflC 2..289 CDD:440099 79/290 (27%)

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