DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mec2 and AT5G54100

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_200221.1 Gene:AT5G54100 / 835497 AraportID:AT5G54100 Length:401 Species:Arabidopsis thaliana


Alignment Length:375 Identity:94/375 - (25%)
Similarity:156/375 - (41%) Gaps:85/375 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MRNSGPASS--TAYMVNMGAAGMAPEPALRVPGTTQQYRGFKTSENEPKGCMEWVVTLFSVLIFI 78
            :||.....|  |:|.:|      .|.|:...  |::......::...|:       .||....| 
plant    38 VRNFSSTGSPLTSYQIN------KPSPSKSF--TSRLLHQSSSAGTPPQ-------QLFGARSF- 86

  Fly    79 ITSPIAIFICF----------KVVAEYERAIIFRLGRLSGGARGPGMFFILPCIDEYRKV-DLRT 132
             :||.:.|..:          ::|.|.:..:|.|.|:.. .....|:.|::|.:|....| .|:.
plant    87 -SSPSSDFNSYHINPPSNWGIRIVPERKACVIERFGKFH-TTLPAGIHFLVPFVDRIAYVHSLKE 149

  Fly   133 VTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVGTRNLSEL 197
            ....:..|..:|||:|::.:|.|:|.:|.||..|...||:...:...||.||:|:.:|...|.:.
plant   150 EAIPIGNQTAITKDNVSIHIDGVLYVKIVDPKLASYGVENPIYAVMQLAQTTMRSELGKITLDKT 214

  Fly   198 LTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAARDARAKVIAAEGE- 261
            ..||:||...:...::.|.:.||:...|.||:|:..|..::.||..:|||.|..||:::.:||| 
plant   215 FEERDTLNEKIVEAINVAAKDWGLQCLRYEIRDIMPPNGVRVAMEMQAEAERKKRAQILESEGER 279

  Fly   262 ---------KKS-----------------------------ATA---------LKEASDVISASP 279
                     |||                             |||         ||||....:||.
plant   280 QAHINRADGKKSSVILESEAAMMDQVNRAQGEAEAILARAQATAKGLAMVSQSLKEAGGEEAASL 344

  Fly   280 SALQLRYLQTLSSISAEKNSTIIFPL----PMELLTPYLAKYAHLMGPPP 325
            ...: :|:|....| |::.:|::.|.    |..::...|..|..|....|
plant   345 RVAE-QYIQAFGKI-AKEGTTMLLPSNVDNPASMIAQALGMYKGLSTKVP 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 69/259 (27%)
AT5G54100NP_200221.1 HflC 105..369 CDD:440099 73/266 (27%)

Return to query results.
Submit another query.