DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mec2 and PHB3

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_198893.1 Gene:PHB3 / 834077 AraportID:AT5G40770 Length:277 Species:Arabidopsis thaliana


Alignment Length:222 Identity:57/222 - (25%)
Similarity:101/222 - (45%) Gaps:28/222 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 ERAIIF-RLGRLSGGARGPGMFFILPCIDEYRKVDLRTV--TFNVPQQEMLTKD--SVTVTVDAV 155
            |||:|| |...:.....|.|..|::|.:......|:||.  ||:....   |||  .|.:|:..:
plant    39 ERAVIFDRFRGVMDQTVGEGTHFLIPILQRPHIFDIRTKPHTFSSISG---TKDLQMVNLTLRVL 100

  Fly   156 VYYRISDPLYAVIQVEDYSMSTRLLAA---TTLRNIVGTRNLSELLTERETLAHNMQATLDEATE 217
            ....:|...| :.|........::|.:   ..|:.:|...|..:|||||..::..::.:|....:
plant   101 SRPEVSRLPY-IFQTLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLITRAK 164

  Fly   218 PWGVMVERVEIKDVSLPVSMQRAM----AAEAEAAR----------DARAKVIAAEGEKKSATAL 268
            .:.::::.|.|..:|..|...||:    .|:.||.|          :.||.||.||||.::|..:
plant   165 DFNIVLDDVAITHLSYGVEFSRAVEQKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLI 229

  Fly   269 KEASDVISASPSALQLRYLQTLSSISA 295
            .:|:  ..|....::||.::....|::
plant   230 SDAT--AKAGMGLIELRRIEASREIAS 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 51/210 (24%)
PHB3NP_198893.1 SPFH_prohibitin 32..226 CDD:259799 51/190 (27%)
vATP-synt_E 213..>253 CDD:419987 13/41 (32%)

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