DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mec2 and PHB1

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_194580.1 Gene:PHB1 / 828969 AraportID:AT4G28510 Length:288 Species:Arabidopsis thaliana


Alignment Length:223 Identity:56/223 - (25%)
Similarity:103/223 - (46%) Gaps:35/223 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 RAIIF-RLGRLSGGARGPGMFFILPCIDEYRKVDLRTVTFNVPQQEML------TKDSVTVTVDA 154
            |||:| ||..:.......|...::|..:       |.|.::|..:..|      ::|...|.:..
plant    44 RAIMFNRLVGIKDKVYPEGTHLMIPWFE-------RPVIYDVRARPYLVESTSGSRDLQMVKIGL 101

  Fly   155 VVYYR-ISDPLYAVIQVEDYSMSTRLLAA---TTLRNIVGTRNLSELLTERETLAHNMQATLDEA 215
            .|..| ::|.|..:.:....:.|.|:|.:   .||:.:|...|.|:|:|:||.::..::..|.|.
plant   102 RVLTRPMADQLPEIYRSLGENYSERVLPSIINETLKAVVAQYNASQLITQREAVSREIRKILTER 166

  Fly   216 TEPWGVMVERVEI------KDVSLPVSMQRAMAAEAEAAR--------DARAKVIAAEGEKKSAT 266
            ...:.|.::.|.|      |:.:..:..::..|.|||.|:        |.|:.||.|:||.|||.
plant   167 AANFNVALDDVSITNLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKRSAVIRAQGEAKSAQ 231

  Fly   267 ALKEASDVISASPSALQLRYLQTLSSIS 294
            .:.:|   |:.:.:.:.||.::....|:
plant   232 LIGQA---IANNQAFITLRKIEAAREIA 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 50/212 (24%)
PHB1NP_194580.1 SPFH_prohibitin 36..230 CDD:259799 49/192 (26%)

Return to query results.
Submit another query.