DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mec2 and PHB6

DIOPT Version :10

Sequence 1:NP_573357.1 Gene:Mec2 / 32905 FlyBaseID:FBgn0030993 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_179643.1 Gene:PHB6 / 816575 AraportID:AT2G20530 Length:286 Species:Arabidopsis thaliana


Alignment Length:217 Identity:55/217 - (25%)
Similarity:101/217 - (46%) Gaps:23/217 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 RAIIF-RLGRLSGGARGPGMFFILPCIDEYRKVDLRTVTFNVPQQEMLTKDSVTVTVDAVVYYR- 159
            |||:| ||..:.......|...::|..:.....|:|...:.| :....::|...|.:...|..| 
plant    42 RAIVFNRLVGIKDKVYPEGTHLMIPWFERPIIYDVRAKPYLV-ESTSGSRDLQMVKIGLRVLTRP 105

  Fly   160 ISDPLYAVIQVEDYSMSTRLLAA---TTLRNIVGTRNLSELLTERETLAHNMQATLDEATEPWGV 221
            ::|.|..|.:....:...|:|.:   .||:.:|...|.|:|:|:||:::..::..|......:.:
plant   106 MADQLPEVYRSLGENYRERVLPSIIHETLKAVVAQYNASQLITQRESVSREIRKILTLRAANFHI 170

  Fly   222 MVERVEI------KDVSLPVSMQRAMAAEAEAAR--------DARAKVIAAEGEKKSATALKEAS 272
            .::.|.|      |:.:..:..::..|.|||.|:        |.|:.||.||||.|||..:.:| 
plant   171 ALDDVSITGLTFGKEFTAAIEGKQVAAQEAERAKFIVEKAEQDKRSAVIRAEGEAKSAQLIGQA- 234

  Fly   273 DVISASPSALQLRYLQTLSSIS 294
              |:.:.:.|.||.::....|:
plant   235 --IANNQAFLTLRKIEAAREIA 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mec2NP_573357.1 SPFH_like 107..314 CDD:473137 49/206 (24%)
PHB6NP_179643.1 SPFH_prohibitin 34..228 CDD:259799 47/186 (25%)

Return to query results.
Submit another query.